Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RNU6-961P-201ENST00000363893 105 ntBASIC3.67□□□□□ -1.82
PMS1P54277 Y_RNA.230-201ENST00000364348 109 ntBASIC3.67□□□□□ -1.82
PMS1P54277 RNU6-326P-201ENST00000365480 107 ntBASIC3.67□□□□□ -1.82
PMS1P54277 Y_RNA.569-201ENST00000384749 103 ntBASIC3.67□□□□□ -1.82
PMS1P54277 Y_RNA.570-201ENST00000384750 101 ntBASIC3.67□□□□□ -1.82
PMS1P54277 MIR490-201ENST00000384865 128 ntBASIC3.67□□□□□ -1.82
PMS1P54277 MIR134-201ENST00000385258 73 ntBASIC3.67□□□□□ -1.82
PMS1P54277 RNU6-750P-201ENST00000390946 107 ntBASIC3.67□□□□□ -1.82
PMS1P54277 U3.26-201ENST00000391236 204 ntBASIC3.67□□□□□ -1.82
PMS1P54277 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.67□□□□□ -1.82
PMS1P54277 PIGPP3-201ENST00000425307 415 ntBASIC3.67□□□□□ -1.82
PMS1P54277 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.67□□□□□ -1.82
PMS1P54277 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.67□□□□□ -1.82
PMS1P54277 GOT2P5-201ENST00000433995 546 ntBASIC3.67□□□□□ -1.82
PMS1P54277 HMGN1P18-201ENST00000457642 277 ntBASIC3.67□□□□□ -1.82
PMS1P54277 RNU5F-2P-201ENST00000516066 82 ntBASIC3.67□□□□□ -1.82
PMS1P54277 AC023632.4-201ENST00000517783 191 ntBASIC3.67□□□□□ -1.82
PMS1P54277 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.67□□□□□ -1.82
PMS1P54277 MIR3923-201ENST00000579521 83 ntBASIC3.67□□□□□ -1.82
PMS1P54277 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.67□□□□□ -1.82
PMS1P54277 AC017071.1-201ENST00000564407 2204 ntBASIC3.67□□□□□ -1.82
PMS1P54277 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PMS1P54277 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PMS1P54277 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
PMS1P54277 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PMS1P54277 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PMS1P54277 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.66□□□□□ -1.82
PMS1P54277 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PMS1P54277 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PMS1P54277 Y_RNA.44-201ENST00000362676 108 ntBASIC3.66□□□□□ -1.82
PMS1P54277 SNORD114-19-201ENST00000363072 75 ntBASIC3.66□□□□□ -1.82
PMS1P54277 Y_RNA.179-201ENST00000363844 90 ntBASIC3.66□□□□□ -1.82
PMS1P54277 Y_RNA.297-201ENST00000364950 91 ntBASIC3.66□□□□□ -1.82
PMS1P54277 RNU6-1175P-201ENST00000365200 107 ntBASIC3.66□□□□□ -1.82
PMS1P54277 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.66□□□□□ -1.82
PMS1P54277 RNA5SP229-201ENST00000410809 99 ntBASIC3.66□□□□□ -1.82
PMS1P54277 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.66□□□□□ -1.82
PMS1P54277 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.66□□□□□ -1.82
PMS1P54277 AC006539.3-201ENST00000454258 129 ntBASIC3.66□□□□□ -1.82
PMS1P54277 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.66□□□□□ -1.82
PMS1P54277 AC007215.1-201ENST00000464893 276 ntBASIC3.66□□□□□ -1.82
PMS1P54277 SNORA31.1-201ENST00000515993 133 ntBASIC3.66□□□□□ -1.82
PMS1P54277 SNORA31.5-201ENST00000516190 133 ntBASIC3.66□□□□□ -1.82
PMS1P54277 RNU1-143P-201ENST00000516296 146 ntBASIC3.66□□□□□ -1.82
PMS1P54277 CYCSP23-201ENST00000519781 313 ntBASIC3.66□□□□□ -1.82
PMS1P54277 RRN3P3-201ENST00000549207 578 ntBASIC3.66□□□□□ -1.82
PMS1P54277 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.66□□□□□ -1.82
PMS1P54277 AC005176.2-201ENST00000596933 147 ntBASIC3.66□□□□□ -1.82
PMS1P54277 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.66□□□□□ -1.82
PMS1P54277 AL034555.1-201ENST00000604816 211 ntBASIC3.66□□□□□ -1.82
PMS1P54277 U1.23-201ENST00000610293 146 ntBASIC3.66□□□□□ -1.82
PMS1P54277 AL357075.2-201ENST00000614906 189 ntBASIC3.66□□□□□ -1.82
PMS1P54277 RNU1-68P-201ENST00000615382 146 ntBASIC3.66□□□□□ -1.82
PMS1P54277 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.66□□□□□ -1.82
PMS1P54277 U1.39-201ENST00000621562 146 ntBASIC3.66□□□□□ -1.82
PMS1P54277 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PMS1P54277 MTND5P35-201ENST00000557537 1720 ntBASIC3.66□□□□□ -1.82
PMS1P54277 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PMS1P54277 BX322639.1-202ENST00000423987 2213 ntBASIC3.65□□□□□ -1.83
PMS1P54277 Y_RNA.29-201ENST00000362570 113 ntBASIC3.65□□□□□ -1.83
PMS1P54277 RNU6-1010P-201ENST00000362757 107 ntBASIC3.65□□□□□ -1.83
PMS1P54277 RNU6-529P-201ENST00000363383 104 ntBASIC3.65□□□□□ -1.83
PMS1P54277 Y_RNA.200-201ENST00000364018 102 ntBASIC3.65□□□□□ -1.83
PMS1P54277 Y_RNA.274-201ENST00000364714 101 ntBASIC3.65□□□□□ -1.83
PMS1P54277 MIR549A-201ENST00000385268 96 ntBASIC3.65□□□□□ -1.83
PMS1P54277 RNU1-101P-201ENST00000391171 127 ntBASIC3.65□□□□□ -1.83
PMS1P54277 MIR320B2-201ENST00000408479 138 ntBASIC3.65□□□□□ -1.83
PMS1P54277 UQCRBP2-201ENST00000447827 297 ntBASIC3.65□□□□□ -1.83
PMS1P54277 SUMO1P2-201ENST00000452524 304 ntBASIC3.65□□□□□ -1.83
PMS1P54277 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.65□□□□□ -1.83
PMS1P54277 PRELID3BP1-201ENST00000457142 540 ntBASIC3.65□□□□□ -1.83
PMS1P54277 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.65□□□□□ -1.83
PMS1P54277 AC093663.1-201ENST00000497190 394 ntBASIC3.65□□□□□ -1.83
PMS1P54277 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.65□□□□□ -1.83
PMS1P54277 FCF1P8-201ENST00000510322 597 ntBASIC3.65□□□□□ -1.83
PMS1P54277 SNORA31.21-201ENST00000517180 77 ntBASIC3.65□□□□□ -1.83
PMS1P54277 AC025281.1-201ENST00000567026 265 ntBASIC3.65□□□□□ -1.83
PMS1P54277 AC012493.2-201ENST00000595083 291 ntBASIC3.65□□□□□ -1.83
PMS1P54277 AL356575.1-201ENST00000603008 283 ntBASIC3.65□□□□□ -1.83
PMS1P54277 AC069200.1-201ENST00000609511 323 ntBASIC3.65□□□□□ -1.83
PMS1P54277 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PMS1P54277 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PMS1P54277 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PMS1P54277 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.64□□□□□ -1.83
PMS1P54277 SNORA25.1-201ENST00000362326 128 ntBASIC3.64□□□□□ -1.83
PMS1P54277 RNU6-245P-201ENST00000384020 107 ntBASIC3.64□□□□□ -1.83
PMS1P54277 RNU6-514P-201ENST00000384208 107 ntBASIC3.64□□□□□ -1.83
PMS1P54277 RNU6-793P-201ENST00000384233 104 ntBASIC3.64□□□□□ -1.83
PMS1P54277 MIR554-201ENST00000384874 96 ntBASIC3.64□□□□□ -1.83
PMS1P54277 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.64□□□□□ -1.83
PMS1P54277 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.64□□□□□ -1.83
PMS1P54277 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.64□□□□□ -1.83
PMS1P54277 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.64□□□□□ -1.83
PMS1P54277 AC007395.1-201ENST00000451333 677 ntBASIC3.64□□□□□ -1.83
PMS1P54277 AC008155.2-201ENST00000464337 397 ntBASIC3.64□□□□□ -1.83
PMS1P54277 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.64□□□□□ -1.83
PMS1P54277 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.64□□□□□ -1.83
PMS1P54277 SNORD59.2-201ENST00000516873 68 ntBASIC3.64□□□□□ -1.83
PMS1P54277 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.64□□□□□ -1.83
PMS1P54277 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms