Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COPB1P53618 MTCO3P29-201ENST00000432119 779 ntBASIC2.92□□□□□ -1.94
COPB1P53618 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.92□□□□□ -1.94
COPB1P53618 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.92□□□□□ -1.94
COPB1P53618 Y_RNA.721-201ENST00000517207 102 ntBASIC2.92□□□□□ -1.94
COPB1P53618 AC010928.2-201ENST00000588017 287 ntBASIC2.92□□□□□ -1.94
COPB1P53618 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.92□□□□□ -1.94
COPB1P53618 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.91□□□□□ -1.94
COPB1P53618 ZNF72P-201ENST00000425869 1908 ntBASIC2.91□□□□□ -1.94
COPB1P53618 AC233263.6-201ENST00000631132 1963 ntBASIC2.91□□□□□ -1.94
COPB1P53618 Y_RNA.106-201ENST00000363189 100 ntBASIC2.91□□□□□ -1.94
COPB1P53618 RNU6-1286P-201ENST00000383871 107 ntBASIC2.91□□□□□ -1.94
COPB1P53618 Y_RNA.405-201ENST00000383979 100 ntBASIC2.91□□□□□ -1.94
COPB1P53618 Y_RNA.451-201ENST00000384200 100 ntBASIC2.91□□□□□ -1.94
COPB1P53618 Y_RNA.524-201ENST00000384564 100 ntBASIC2.91□□□□□ -1.94
COPB1P53618 Y_RNA.557-201ENST00000384680 107 ntBASIC2.91□□□□□ -1.94
COPB1P53618 Y_RNA.561-201ENST00000384694 100 ntBASIC2.91□□□□□ -1.94
COPB1P53618 MIR544A-201ENST00000384855 91 ntBASIC2.91□□□□□ -1.94
COPB1P53618 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
COPB1P53618 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
COPB1P53618 RNA5SP390-201ENST00000410191 113 ntBASIC2.91□□□□□ -1.94
COPB1P53618 Y_RNA.605-201ENST00000410577 105 ntBASIC2.91□□□□□ -1.94
COPB1P53618 RNU2-49P-201ENST00000410666 184 ntBASIC2.91□□□□□ -1.94
COPB1P53618 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.91□□□□□ -1.94
COPB1P53618 AC007098.1-201ENST00000420122 367 ntBASIC2.91□□□□□ -1.94
COPB1P53618 AL358453.1-201ENST00000422522 250 ntBASIC2.91□□□□□ -1.94
COPB1P53618 AC092423.1-201ENST00000430165 186 ntBASIC2.91□□□□□ -1.94
COPB1P53618 Z82188.1-201ENST00000436709 154 ntBASIC2.91□□□□□ -1.94
COPB1P53618 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.91□□□□□ -1.94
COPB1P53618 MTATP8P1-201ENST00000467115 207 ntBASIC2.91□□□□□ -1.94
COPB1P53618 RPL23AP75-201ENST00000491601 451 ntBASIC2.91□□□□□ -1.94
COPB1P53618 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.91□□□□□ -1.94
COPB1P53618 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.91□□□□□ -1.94
COPB1P53618 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.91□□□□□ -1.94
COPB1P53618 SNORA31.21-201ENST00000517180 77 ntBASIC2.91□□□□□ -1.94
COPB1P53618 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.91□□□□□ -1.94
COPB1P53618 AC079600.2-201ENST00000550076 130 ntBASIC2.91□□□□□ -1.94
COPB1P53618 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.91□□□□□ -1.94
COPB1P53618 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.91□□□□□ -1.94
COPB1P53618 AC090897.2-201ENST00000581715 130 ntBASIC2.91□□□□□ -1.94
COPB1P53618 RPL23AP88-201ENST00000605759 454 ntBASIC2.91□□□□□ -1.94
COPB1P53618 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.91□□□□□ -1.94
COPB1P53618 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.91□□□□□ -1.94
COPB1P53618 RBBP8P1-201ENST00000449447 1844 ntBASIC2.91□□□□□ -1.94
COPB1P53618 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.9□□□□□ -1.95
COPB1P53618 Y_RNA.389-201ENST00000383924 113 ntBASIC2.9□□□□□ -1.95
COPB1P53618 RNU6-463P-201ENST00000384340 107 ntBASIC2.9□□□□□ -1.95
COPB1P53618 RNU6-750P-201ENST00000390946 107 ntBASIC2.9□□□□□ -1.95
COPB1P53618 MIR190B-201ENST00000401119 79 ntBASIC2.9□□□□□ -1.95
COPB1P53618 Y_RNA.592-201ENST00000410274 109 ntBASIC2.9□□□□□ -1.95
COPB1P53618 RNA5SP21-201ENST00000410917 96 ntBASIC2.9□□□□□ -1.95
COPB1P53618 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
COPB1P53618 EIF1AXP1-201ENST00000419267 435 ntBASIC2.9□□□□□ -1.95
COPB1P53618 AL031183.1-201ENST00000457667 207 ntBASIC2.9□□□□□ -1.95
COPB1P53618 RPL22P13-201ENST00000493291 347 ntBASIC2.9□□□□□ -1.95
COPB1P53618 AC093852.1-201ENST00000503587 266 ntBASIC2.9□□□□□ -1.95
COPB1P53618 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.9□□□□□ -1.95
COPB1P53618 RNU5F-8P-201ENST00000515941 111 ntBASIC2.9□□□□□ -1.95
COPB1P53618 RNU5B-3P-201ENST00000516601 115 ntBASIC2.9□□□□□ -1.95
COPB1P53618 RNU6-826P-201ENST00000516827 104 ntBASIC2.9□□□□□ -1.95
COPB1P53618 AC144568.1-201ENST00000520139 137 ntBASIC2.9□□□□□ -1.95
COPB1P53618 AC022616.4-201ENST00000522985 181 ntBASIC2.9□□□□□ -1.95
COPB1P53618 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.9□□□□□ -1.95
COPB1P53618 HSBP1P1-201ENST00000555205 166 ntBASIC2.9□□□□□ -1.95
COPB1P53618 ELOCP29-201ENST00000588193 334 ntBASIC2.9□□□□□ -1.95
COPB1P53618 VN1R91P-201ENST00000594377 169 ntBASIC2.9□□□□□ -1.95
COPB1P53618 AC016727.2-201ENST00000603988 621 ntBASIC2.9□□□□□ -1.95
COPB1P53618 AP000942.4-201ENST00000604811 241 ntBASIC2.9□□□□□ -1.95
COPB1P53618 AL359198.2-201ENST00000611836 194 ntBASIC2.9□□□□□ -1.95
COPB1P53618 AL138825.1-201ENST00000618587 192 ntBASIC2.9□□□□□ -1.95
COPB1P53618 SCARNA4-201ENST00000629045 128 ntBASIC2.9□□□□□ -1.95
COPB1P53618 AL450472.1-202ENST00000637286 180 ntBASIC2.9□□□□□ -1.95
COPB1P53618 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COPB1P53618 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COPB1P53618 AC233981.2-201ENST00000611524 1614 ntBASIC2.9□□□□□ -1.95
COPB1P53618 AC010889.1-201ENST00000566193 2666 ntBASIC2.89□□□□□ -1.95
COPB1P53618 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COPB1P53618 RNU5B-2P-201ENST00000363036 113 ntBASIC2.89□□□□□ -1.95
COPB1P53618 RNU6-1141P-201ENST00000364520 107 ntBASIC2.89□□□□□ -1.95
COPB1P53618 RNU6-450P-201ENST00000364654 107 ntBASIC2.89□□□□□ -1.95
COPB1P53618 SNORA14A-201ENST00000364773 135 ntBASIC2.89□□□□□ -1.95
COPB1P53618 RNU4-9P-201ENST00000364951 139 ntBASIC2.89□□□□□ -1.95
COPB1P53618 SNORD14.1-201ENST00000365609 90 ntBASIC2.89□□□□□ -1.95
COPB1P53618 RNU6-968P-201ENST00000384076 107 ntBASIC2.89□□□□□ -1.95
COPB1P53618 RNU6-1222P-201ENST00000384615 107 ntBASIC2.89□□□□□ -1.95
COPB1P53618 RN7SKP61-201ENST00000410642 295 ntBASIC2.89□□□□□ -1.95
COPB1P53618 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.89□□□□□ -1.95
COPB1P53618 AC004383.1-201ENST00000438135 289 ntBASIC2.89□□□□□ -1.95
COPB1P53618 AL135938.1-201ENST00000443141 297 ntBASIC2.89□□□□□ -1.95
COPB1P53618 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.89□□□□□ -1.95
COPB1P53618 AP000705.1-201ENST00000454567 350 ntBASIC2.89□□□□□ -1.95
COPB1P53618 RNU7-169P-201ENST00000459456 61 ntBASIC2.89□□□□□ -1.95
COPB1P53618 AF186996.7-201ENST00000492781 209 ntBASIC2.89□□□□□ -1.95
COPB1P53618 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.89□□□□□ -1.95
COPB1P53618 RNU6-911P-201ENST00000516523 104 ntBASIC2.89□□□□□ -1.95
COPB1P53618 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.89□□□□□ -1.95
COPB1P53618 AC004486.1-201ENST00000546846 233 ntBASIC2.89□□□□□ -1.95
COPB1P53618 AC016256.1-201ENST00000547971 354 ntBASIC2.89□□□□□ -1.95
COPB1P53618 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.89□□□□□ -1.95
COPB1P53618 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms