Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC034244.1-201ENST00000507687 207 ntBASIC0.96□□□□□ -2.26
RPA3P35244 RNU6-1041P-201ENST00000516254 102 ntBASIC0.96□□□□□ -2.26
RPA3P35244 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.96□□□□□ -2.26
RPA3P35244 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.96□□□□□ -2.26
RPA3P35244 AL365434.2-201ENST00000607979 234 ntBASIC0.96□□□□□ -2.26
RPA3P35244 AC138649.3-201ENST00000622154 254 ntBASIC0.96□□□□□ -2.26
RPA3P35244 RNU5F-7P-201ENST00000363696 115 ntBASIC0.95□□□□□ -2.26
RPA3P35244 RNU6-1065P-201ENST00000384513 106 ntBASIC0.95□□□□□ -2.26
RPA3P35244 MIR194-1-201ENST00000384892 85 ntBASIC0.95□□□□□ -2.26
RPA3P35244 RPL37P10-201ENST00000412884 288 ntBASIC0.95□□□□□ -2.26
RPA3P35244 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.95□□□□□ -2.26
RPA3P35244 AC078809.1-201ENST00000427601 140 ntBASIC0.95□□□□□ -2.26
RPA3P35244 GTF2IP13-201ENST00000438487 386 ntBASIC0.95□□□□□ -2.26
RPA3P35244 EPS15P1-201ENST00000448836 336 ntBASIC0.95□□□□□ -2.26
RPA3P35244 AL133217.1-201ENST00000450980 425 ntBASIC0.95□□□□□ -2.26
RPA3P35244 snoU13.27-201ENST00000459278 104 ntBASIC0.95□□□□□ -2.26
RPA3P35244 AL163973.1-201ENST00000484753 577 ntBASIC0.95□□□□□ -2.26
RPA3P35244 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.95□□□□□ -2.26
RPA3P35244 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.95□□□□□ -2.26
RPA3P35244 CENPUP1-201ENST00000526649 1202 ntBASIC0.95□□□□□ -2.26
RPA3P35244 AC022878.1-201ENST00000530684 149 ntBASIC0.95□□□□□ -2.26
RPA3P35244 AL512310.8-201ENST00000550183 120 ntBASIC0.95□□□□□ -2.26
RPA3P35244 AP005136.1-201ENST00000579765 429 ntBASIC0.95□□□□□ -2.26
RPA3P35244 MIR4781-201ENST00000585250 76 ntBASIC0.95□□□□□ -2.26
RPA3P35244 TUSC7.1-201ENST00000610969 165 ntBASIC0.95□□□□□ -2.26
RPA3P35244 AC091304.9-201ENST00000612091 226 ntBASIC0.95□□□□□ -2.26
RPA3P35244 AL133216.2-202ENST00000634512 349 ntBASIC0.95□□□□□ -2.26
RPA3P35244 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.95□□□□□ -2.26
RPA3P35244 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
RPA3P35244 RNU6-500P-201ENST00000362349 107 ntBASIC0.94□□□□□ -2.26
RPA3P35244 RNU6-1287P-201ENST00000362914 107 ntBASIC0.94□□□□□ -2.26
RPA3P35244 RNU6-1060P-201ENST00000384664 107 ntBASIC0.94□□□□□ -2.26
RPA3P35244 AL117342.1-201ENST00000404861 406 ntBASIC0.94□□□□□ -2.26
RPA3P35244 RN7SKP61-201ENST00000410642 295 ntBASIC0.94□□□□□ -2.26
RPA3P35244 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.94□□□□□ -2.26
RPA3P35244 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.94□□□□□ -2.26
RPA3P35244 AC073910.1-201ENST00000445047 438 ntBASIC0.94□□□□□ -2.26
RPA3P35244 AC132479.1-201ENST00000449160 144 ntBASIC0.94□□□□□ -2.26
RPA3P35244 AC007395.1-201ENST00000451333 677 ntBASIC0.94□□□□□ -2.26
RPA3P35244 AC007547.1-201ENST00000462177 490 ntBASIC0.94□□□□□ -2.26
RPA3P35244 RPS23P4-201ENST00000487908 423 ntBASIC0.94□□□□□ -2.26
RPA3P35244 RNA5SP404-201ENST00000517118 132 ntBASIC0.94□□□□□ -2.26
RPA3P35244 AC109479.2-201ENST00000517842 174 ntBASIC0.94□□□□□ -2.26
RPA3P35244 EIF4A1P12-201ENST00000551910 141 ntBASIC0.94□□□□□ -2.26
RPA3P35244 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.94□□□□□ -2.26
RPA3P35244 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.94□□□□□ -2.26
RPA3P35244 MZT1P2-201ENST00000604387 248 ntBASIC0.94□□□□□ -2.26
RPA3P35244 MIR8065-201ENST00000620577 100 ntBASIC0.94□□□□□ -2.26
RPA3P35244 AC011155.2-201ENST00000623202 216 ntBASIC0.94□□□□□ -2.26
RPA3P35244 U6.114-201ENST00000636407 96 ntBASIC0.94□□□□□ -2.26
RPA3P35244 SNORD114-27-201ENST00000363766 70 ntBASIC0.93□□□□□ -2.26
RPA3P35244 RNU6-877P-201ENST00000383868 107 ntBASIC0.93□□□□□ -2.26
RPA3P35244 RNU6-1026P-201ENST00000384465 108 ntBASIC0.93□□□□□ -2.26
RPA3P35244 SNORA26.3-201ENST00000391119 136 ntBASIC0.93□□□□□ -2.26
RPA3P35244 MTCO1P21-201ENST00000416634 589 ntBASIC0.93□□□□□ -2.26
RPA3P35244 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.93□□□□□ -2.26
RPA3P35244 SNX2P2-201ENST00000424553 323 ntBASIC0.93□□□□□ -2.26
RPA3P35244 MTCO3P29-201ENST00000432119 779 ntBASIC0.93□□□□□ -2.26
RPA3P35244 SNAP23P1-201ENST00000433229 246 ntBASIC0.93□□□□□ -2.26
RPA3P35244 DYNLT3P2-201ENST00000442517 295 ntBASIC0.93□□□□□ -2.26
RPA3P35244 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.93□□□□□ -2.26
RPA3P35244 AC013470.1-201ENST00000453438 462 ntBASIC0.93□□□□□ -2.26
RPA3P35244 AL162395.1-201ENST00000457882 422 ntBASIC0.93□□□□□ -2.26
RPA3P35244 AC091874.1-201ENST00000511402 339 ntBASIC0.93□□□□□ -2.26
RPA3P35244 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.93□□□□□ -2.26
RPA3P35244 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.93□□□□□ -2.26
RPA3P35244 ELOCP32-201ENST00000548625 324 ntBASIC0.93□□□□□ -2.26
RPA3P35244 MTND1P8-201ENST00000571424 950 ntBASIC0.93□□□□□ -2.26
RPA3P35244 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.93□□□□□ -2.26
RPA3P35244 CTHRC1P1-201ENST00000605383 469 ntBASIC0.93□□□□□ -2.26
RPA3P35244 AL133173.2-201ENST00000614270 90 ntBASIC0.93□□□□□ -2.26
RPA3P35244 AC126177.8-201ENST00000618339 1015 ntBASIC0.93□□□□□ -2.26
RPA3P35244 AC106754.1-201ENST00000562632 1513 ntBASIC0.93□□□□□ -2.26
RPA3P35244 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.93□□□□□ -2.26
RPA3P35244 AC092268.1-201ENST00000342691 405 ntBASIC0.92□□□□□ -2.26
RPA3P35244 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
RPA3P35244 RNU6-552P-201ENST00000362869 119 ntBASIC0.92□□□□□ -2.26
RPA3P35244 SNORA4.2-201ENST00000365313 147 ntBASIC0.92□□□□□ -2.26
RPA3P35244 Y_RNA.367-201ENST00000365544 101 ntBASIC0.92□□□□□ -2.26
RPA3P35244 SNORA36A-201ENST00000384221 132 ntBASIC0.92□□□□□ -2.26
RPA3P35244 AC106883.1-201ENST00000418805 562 ntBASIC0.92□□□□□ -2.26
RPA3P35244 AL354692.1-201ENST00000423044 315 ntBASIC0.92□□□□□ -2.26
RPA3P35244 ISCA1P6-201ENST00000427740 390 ntBASIC0.92□□□□□ -2.26
RPA3P35244 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.92□□□□□ -2.26
RPA3P35244 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.92□□□□□ -2.26
RPA3P35244 ZNF114P1-201ENST00000453500 292 ntBASIC0.92□□□□□ -2.26
RPA3P35244 MTCYBP1-201ENST00000454315 1119 ntBASIC0.92□□□□□ -2.26
RPA3P35244 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.92□□□□□ -2.26
RPA3P35244 AL163195.1-201ENST00000496941 348 ntBASIC0.92□□□□□ -2.26
RPA3P35244 AC091435.1-201ENST00000505442 584 ntBASIC0.92□□□□□ -2.26
RPA3P35244 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.92□□□□□ -2.26
RPA3P35244 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.92□□□□□ -2.26
RPA3P35244 MTCO3P7-201ENST00000510008 774 ntBASIC0.92□□□□□ -2.26
RPA3P35244 RNU2-46P-201ENST00000517038 113 ntBASIC0.92□□□□□ -2.26
RPA3P35244 AC090572.1-201ENST00000519251 160 ntBASIC0.92□□□□□ -2.26
RPA3P35244 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.92□□□□□ -2.26
RPA3P35244 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.92□□□□□ -2.26
RPA3P35244 AC090517.1-201ENST00000569307 266 ntBASIC0.92□□□□□ -2.26
RPA3P35244 Z98751.3-201ENST00000604447 521 ntBASIC0.92□□□□□ -2.26
RPA3P35244 AC004492.1-201ENST00000607036 742 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms