Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DAP3P1-201ENST00000441522 278 ntBASIC2.16□□□□□ -2.06
SHC1P29353 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.16□□□□□ -2.06
SHC1P29353 RPL26P9-201ENST00000457466 433 ntBASIC2.16□□□□□ -2.06
SHC1P29353 RPS29P27-201ENST00000463711 170 ntBASIC2.16□□□□□ -2.06
SHC1P29353 AC068781.1-201ENST00000488231 618 ntBASIC2.16□□□□□ -2.06
SHC1P29353 AC234781.5-201ENST00000508429 271 ntBASIC2.16□□□□□ -2.06
SHC1P29353 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
SHC1P29353 RNU6-581P-201ENST00000516214 105 ntBASIC2.16□□□□□ -2.06
SHC1P29353 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.16□□□□□ -2.06
SHC1P29353 AP005902.1-201ENST00000521358 186 ntBASIC2.16□□□□□ -2.06
SHC1P29353 AC021739.1-201ENST00000559631 174 ntBASIC2.16□□□□□ -2.06
SHC1P29353 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.16□□□□□ -2.06
SHC1P29353 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.16□□□□□ -2.06
SHC1P29353 MIR4273-201ENST00000582824 84 ntBASIC2.16□□□□□ -2.06
SHC1P29353 BNIP3P16-201ENST00000589779 534 ntBASIC2.16□□□□□ -2.06
SHC1P29353 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.16□□□□□ -2.06
SHC1P29353 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.16□□□□□ -2.06
SHC1P29353 AL158827.2-201ENST00000602494 330 ntBASIC2.16□□□□□ -2.06
SHC1P29353 AC005014.2-201ENST00000607795 599 ntBASIC2.16□□□□□ -2.06
SHC1P29353 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.16□□□□□ -2.06
SHC1P29353 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.16□□□□□ -2.06
SHC1P29353 AL691447.3-201ENST00000635020 330 ntBASIC2.16□□□□□ -2.06
SHC1P29353 IGHVIII-44-202ENST00000636235 289 ntBASIC2.16□□□□□ -2.06
SHC1P29353 AC005336.3-201ENST00000623833 2679 ntBASIC2.16□□□□□ -2.06
SHC1P29353 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHC1P29353 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SHC1P29353 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SHC1P29353 AC135776.4-201ENST00000624300 1904 ntBASIC2.15□□□□□ -2.06
SHC1P29353 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SHC1P29353 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SHC1P29353 SNORD50.1-201ENST00000362987 71 ntBASIC2.15□□□□□ -2.07
SHC1P29353 SNORD114-30-201ENST00000364448 72 ntBASIC2.15□□□□□ -2.07
SHC1P29353 RNU6-933P-201ENST00000384424 107 ntBASIC2.15□□□□□ -2.07
SHC1P29353 Y_RNA.533-201ENST00000384596 114 ntBASIC2.15□□□□□ -2.07
SHC1P29353 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.15□□□□□ -2.07
SHC1P29353 MCFD2P1-201ENST00000417812 300 ntBASIC2.15□□□□□ -2.07
SHC1P29353 AC008267.5-201ENST00000424928 265 ntBASIC2.15□□□□□ -2.07
SHC1P29353 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.15□□□□□ -2.07
SHC1P29353 RPL23AP50-201ENST00000434149 455 ntBASIC2.15□□□□□ -2.07
SHC1P29353 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.15□□□□□ -2.07
SHC1P29353 HMGN2P10-201ENST00000448085 265 ntBASIC2.15□□□□□ -2.07
SHC1P29353 AC107626.1-201ENST00000471084 183 ntBASIC2.15□□□□□ -2.07
SHC1P29353 RN7SL636P-201ENST00000497504 294 ntBASIC2.15□□□□□ -2.07
SHC1P29353 ACA59.1-201ENST00000515966 143 ntBASIC2.15□□□□□ -2.07
SHC1P29353 Y_RNA.661-201ENST00000516003 99 ntBASIC2.15□□□□□ -2.07
SHC1P29353 RNU6-1045P-201ENST00000516321 107 ntBASIC2.15□□□□□ -2.07
SHC1P29353 RNU6-612P-201ENST00000516909 102 ntBASIC2.15□□□□□ -2.07
SHC1P29353 RNU6-988P-201ENST00000519081 107 ntBASIC2.15□□□□□ -2.07
SHC1P29353 COX6CP5-201ENST00000527162 228 ntBASIC2.15□□□□□ -2.07
SHC1P29353 AC021269.2-201ENST00000532318 330 ntBASIC2.15□□□□□ -2.07
SHC1P29353 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.15□□□□□ -2.07
SHC1P29353 AC006504.6-201ENST00000590142 199 ntBASIC2.15□□□□□ -2.07
SHC1P29353 AC018889.1-201ENST00000605372 397 ntBASIC2.15□□□□□ -2.07
SHC1P29353 AC103810.6-201ENST00000606708 136 ntBASIC2.15□□□□□ -2.07
SHC1P29353 AL355802.3-201ENST00000607571 545 ntBASIC2.15□□□□□ -2.07
SHC1P29353 MIR8076-201ENST00000611401 83 ntBASIC2.15□□□□□ -2.07
SHC1P29353 AC097372.5-201ENST00000623665 376 ntBASIC2.15□□□□□ -2.07
SHC1P29353 MIR1291-201ENST00000627649 87 ntBASIC2.15□□□□□ -2.07
SHC1P29353 CTSLP2-204ENST00000629029 392 ntBASIC2.15□□□□□ -2.07
SHC1P29353 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SHC1P29353 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SHC1P29353 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.15□□□□□ -2.07
SHC1P29353 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SHC1P29353 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHC1P29353 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SHC1P29353 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.14□□□□□ -2.07
SHC1P29353 Y_RNA.80-201ENST00000362996 102 ntBASIC2.14□□□□□ -2.07
SHC1P29353 RNU6-105P-201ENST00000363909 104 ntBASIC2.14□□□□□ -2.07
SHC1P29353 RNU6-99P-201ENST00000364721 107 ntBASIC2.14□□□□□ -2.07
SHC1P29353 Y_RNA.422-201ENST00000384054 114 ntBASIC2.14□□□□□ -2.07
SHC1P29353 RNU6-1032P-201ENST00000384100 107 ntBASIC2.14□□□□□ -2.07
SHC1P29353 Y_RNA.485-201ENST00000384395 102 ntBASIC2.14□□□□□ -2.07
SHC1P29353 RNU6-1106P-201ENST00000390845 107 ntBASIC2.14□□□□□ -2.07
SHC1P29353 FTH1P15-201ENST00000406984 280 ntBASIC2.14□□□□□ -2.07
SHC1P29353 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.14□□□□□ -2.07
SHC1P29353 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.14□□□□□ -2.07
SHC1P29353 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.14□□□□□ -2.07
SHC1P29353 AL353997.1-201ENST00000432936 108 ntBASIC2.14□□□□□ -2.07
SHC1P29353 RPS15AP5-201ENST00000436276 388 ntBASIC2.14□□□□□ -2.07
SHC1P29353 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.14□□□□□ -2.07
SHC1P29353 AC243964.1-201ENST00000441814 261 ntBASIC2.14□□□□□ -2.07
SHC1P29353 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.14□□□□□ -2.07
SHC1P29353 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.14□□□□□ -2.07
SHC1P29353 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.14□□□□□ -2.07
SHC1P29353 AC116655.1-201ENST00000508324 901 ntBASIC2.14□□□□□ -2.07
SHC1P29353 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.14□□□□□ -2.07
SHC1P29353 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.14□□□□□ -2.07
SHC1P29353 AP004607.1-201ENST00000524456 203 ntBASIC2.14□□□□□ -2.07
SHC1P29353 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.14□□□□□ -2.07
SHC1P29353 MIR5696-201ENST00000578474 85 ntBASIC2.14□□□□□ -2.07
SHC1P29353 AC005899.2-201ENST00000584353 90 ntBASIC2.14□□□□□ -2.07
SHC1P29353 AC067747.1-201ENST00000608026 250 ntBASIC2.14□□□□□ -2.07
SHC1P29353 AC006157.1-201ENST00000611750 366 ntBASIC2.14□□□□□ -2.07
SHC1P29353 AC083806.3-201ENST00000614016 455 ntBASIC2.14□□□□□ -2.07
SHC1P29353 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.14□□□□□ -2.07
SHC1P29353 SCARNA4-202ENST00000625402 129 ntBASIC2.14□□□□□ -2.07
SHC1P29353 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.14□□□□□ -2.07
SHC1P29353 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHC1P29353 AC016717.2-201ENST00000609089 5141 ntBASIC2.13□□□□□ -2.07
SHC1P29353 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms