Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.39□□□□□ -2.03
COL2A1P02458 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.39□□□□□ -2.03
COL2A1P02458 AC005951.2-201ENST00000576282 495 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 MIR3976-201ENST00000606807 139 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 MIR15A-201ENST00000607334 83 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 AC100812.1-201ENST00000607622 580 ntBASIC2.39□□□□□ -2.03
COL2A1P02458 AC010615.1-201ENST00000594254 1764 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 DDX10P1-201ENST00000448545 1933 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL2A1P02458 AC103710.2-202ENST00000641454 2853 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 Y_RNA.106-201ENST00000363189 100 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 RNU6-1249P-201ENST00000363237 111 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 RNU6-266P-201ENST00000364225 107 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 RNU6-371P-201ENST00000364283 108 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 RNU6-593P-201ENST00000364716 112 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 SNORD14.1-201ENST00000365609 90 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 Y_RNA.399-201ENST00000383955 105 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 MIR578-201ENST00000384828 96 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 U3.37-201ENST00000408528 213 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 AL160275.3-201ENST00000423876 471 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.38□□□□□ -2.03
COL2A1P02458 PCMTD1P1-201ENST00000455560 355 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 RPL22P13-201ENST00000493291 347 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 AC005840.1-201ENST00000498412 377 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 MTND1P19-201ENST00000511780 315 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 AC104136.1-201ENST00000512969 394 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 AP004242.1-201ENST00000533701 349 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.38□□□□□ -2.03
COL2A1P02458 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
COL2A1P02458 AC109446.1-201ENST00000566172 220 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 AC016727.2-201ENST00000603988 621 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
COL2A1P02458 AC048347.1-201ENST00000624621 427 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 AL606534.2-204ENST00000635008 178 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL2A1P02458 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
COL2A1P02458 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
COL2A1P02458 AL109809.4-201ENST00000603520 2185 ntBASIC2.38□□□□□ -2.03
COL2A1P02458 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL2A1P02458 AC007256.1-201ENST00000392253 2765 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
COL2A1P02458 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL2A1P02458 Y_RNA.214-201ENST00000364201 112 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 Y_RNA.376-201ENST00000365638 108 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 RNU6-190P-201ENST00000384154 102 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 RNU6-708P-201ENST00000384217 107 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 RNU2-38P-201ENST00000410856 79 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 RNU6-387P-201ENST00000411331 105 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 AC079780.1-201ENST00000428259 207 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 AC104332.2-201ENST00000429959 156 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 AL359672.1-201ENST00000442302 409 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.37□□□□□ -2.03
COL2A1P02458 RPL7P5-201ENST00000471472 736 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.37□□□□□ -2.03
COL2A1P02458 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.37□□□□□ -2.03
COL2A1P02458 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.37□□□□□ -2.03
COL2A1P02458 RNA5SP402-201ENST00000517148 110 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 AC023442.1-201ENST00000531247 422 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 CBX3P8-201ENST00000532412 525 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 HSPE1P20-201ENST00000538133 289 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 HMGB1P14-201ENST00000557424 591 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 AC073410.2-201ENST00000603240 332 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 PRR13P7-201ENST00000605538 430 ntBASIC2.37□□□□□ -2.03
COL2A1P02458 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL2A1P02458 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL2A1P02458 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
COL2A1P02458 Y_RNA.39-201ENST00000362620 98 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 RNU6-128P-201ENST00000383976 107 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 Y_RNA.461-201ENST00000384263 103 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 RNU6-472P-201ENST00000384299 107 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 MIR591-201ENST00000385290 95 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
COL2A1P02458 RNU6-821P-201ENST00000390995 107 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.36□□□□□ -2.03
COL2A1P02458 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.36□□□□□ -2.03
COL2A1P02458 CR769767.1-201ENST00000436337 346 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.36□□□□□ -2.03
COL2A1P02458 AC098869.1-201ENST00000481627 292 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.36□□□□□ -2.03
COL2A1P02458 Y_RNA.668-201ENST00000516233 93 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.36□□□□□ -2.03
COL2A1P02458 MIR4273-201ENST00000582824 84 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 MIR5188-201ENST00000583467 113 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 AC010900.2-201ENST00000604508 210 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 AL110115.1-201ENST00000614396 364 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.36□□□□□ -2.03
COL2A1P02458 MIR8062-201ENST00000621515 85 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.36□□□□□ -2.03
COL2A1P02458 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
COL2A1P02458 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
COL2A1P02458 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.35□□□□□ -2.03
COL2A1P02458 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.35□□□□□ -2.03
COL2A1P02458 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL2A1P02458 Y_RNA.60-201ENST00000362831 98 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 RNU6-457P-201ENST00000363999 107 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 RNU6-1329P-201ENST00000365664 107 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 Y_RNA.489-201ENST00000384410 101 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 RPL21P1-201ENST00000399532 476 ntBASIC2.35□□□□□ -2.03
COL2A1P02458 RNU6-712P-201ENST00000410558 100 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms