Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 Z82195.2-201ENST00000612348 18351 ntBASIC2.33□□□□□ -2.04
PRKNO60260 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.33□□□□□ -2.04
PRKNO60260 AC233981.2-201ENST00000611524 1614 ntBASIC2.33□□□□□ -2.04
PRKNO60260 RNY1P16-201ENST00000363063 111 ntBASIC2.33□□□□□ -2.04
PRKNO60260 Y_RNA.128-201ENST00000363391 112 ntBASIC2.33□□□□□ -2.04
PRKNO60260 Y_RNA.216-201ENST00000364205 93 ntBASIC2.33□□□□□ -2.04
PRKNO60260 Y_RNA.395-201ENST00000383945 109 ntBASIC2.33□□□□□ -2.04
PRKNO60260 RNU6-968P-201ENST00000384076 107 ntBASIC2.33□□□□□ -2.04
PRKNO60260 Y_RNA.463-201ENST00000384271 102 ntBASIC2.33□□□□□ -2.04
PRKNO60260 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.33□□□□□ -2.04
PRKNO60260 RPL23AP95-201ENST00000426806 265 ntBASIC2.33□□□□□ -2.04
PRKNO60260 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.33□□□□□ -2.04
PRKNO60260 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.33□□□□□ -2.04
PRKNO60260 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.33□□□□□ -2.04
PRKNO60260 Y_RNA.631-201ENST00000459607 101 ntBASIC2.33□□□□□ -2.04
PRKNO60260 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.33□□□□□ -2.04
PRKNO60260 RPL31P41-201ENST00000477967 372 ntBASIC2.33□□□□□ -2.04
PRKNO60260 RN7SL429P-201ENST00000479090 223 ntBASIC2.33□□□□□ -2.04
PRKNO60260 RPL36AP48-201ENST00000485521 314 ntBASIC2.33□□□□□ -2.04
PRKNO60260 RN7SL489P-201ENST00000486185 223 ntBASIC2.33□□□□□ -2.04
PRKNO60260 RN7SL327P-201ENST00000488659 223 ntBASIC2.33□□□□□ -2.04
PRKNO60260 AC104564.1-201ENST00000493028 407 ntBASIC2.33□□□□□ -2.04
PRKNO60260 SEM1P1-201ENST00000506694 209 ntBASIC2.33□□□□□ -2.04
PRKNO60260 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.33□□□□□ -2.04
PRKNO60260 AC109329.2-201ENST00000519658 482 ntBASIC2.33□□□□□ -2.04
PRKNO60260 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.33□□□□□ -2.04
PRKNO60260 AC060766.3-201ENST00000591442 263 ntBASIC2.33□□□□□ -2.04
PRKNO60260 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.33□□□□□ -2.04
PRKNO60260 AC005034.5-201ENST00000604219 466 ntBASIC2.33□□□□□ -2.04
PRKNO60260 AC116312.1-201ENST00000606841 314 ntBASIC2.33□□□□□ -2.04
PRKNO60260 Y_RNA.812-201ENST00000610788 101 ntBASIC2.33□□□□□ -2.04
PRKNO60260 uc_338.14-201ENST00000613162 166 ntBASIC2.33□□□□□ -2.04
PRKNO60260 Y_RNA.784-201ENST00000613803 101 ntBASIC2.33□□□□□ -2.04
PRKNO60260 Y_RNA.787-201ENST00000616522 101 ntBASIC2.33□□□□□ -2.04
PRKNO60260 RN7SL853P-201ENST00000617250 223 ntBASIC2.33□□□□□ -2.04
PRKNO60260 Y_RNA.780-201ENST00000617336 101 ntBASIC2.33□□□□□ -2.04
PRKNO60260 Y_RNA.801-201ENST00000619005 101 ntBASIC2.33□□□□□ -2.04
PRKNO60260 AC007792.1-201ENST00000623023 402 ntBASIC2.33□□□□□ -2.04
PRKNO60260 SNORA43.4-201ENST00000629559 138 ntBASIC2.33□□□□□ -2.04
PRKNO60260 IGHVIII-44-202ENST00000636235 289 ntBASIC2.33□□□□□ -2.04
PRKNO60260 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
PRKNO60260 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PRKNO60260 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PRKNO60260 AC069528.2-201ENST00000624849 1991 ntBASIC2.32□□□□□ -2.04
PRKNO60260 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKNO60260 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
PRKNO60260 AL109809.4-201ENST00000603520 2185 ntBASIC2.32□□□□□ -2.04
PRKNO60260 Y_RNA.5-201ENST00000362334 102 ntBASIC2.32□□□□□ -2.04
PRKNO60260 RNU6-490P-201ENST00000362985 107 ntBASIC2.32□□□□□ -2.04
PRKNO60260 SNORD114-19-201ENST00000363072 75 ntBASIC2.32□□□□□ -2.04
PRKNO60260 RNU6-595P-201ENST00000363944 107 ntBASIC2.32□□□□□ -2.04
PRKNO60260 RNU6-99P-201ENST00000364721 107 ntBASIC2.32□□□□□ -2.04
PRKNO60260 RNU1-109P-201ENST00000383960 147 ntBASIC2.32□□□□□ -2.04
PRKNO60260 RNU6-301P-201ENST00000384277 107 ntBASIC2.32□□□□□ -2.04
PRKNO60260 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PRKNO60260 RNU2-23P-201ENST00000410545 195 ntBASIC2.32□□□□□ -2.04
PRKNO60260 AC244670.1-201ENST00000436879 112 ntBASIC2.32□□□□□ -2.04
PRKNO60260 GPM6BP3-201ENST00000442797 145 ntBASIC2.32□□□□□ -2.04
PRKNO60260 AL137792.2-201ENST00000443484 235 ntBASIC2.32□□□□□ -2.04
PRKNO60260 AL513124.1-201ENST00000450410 614 ntBASIC2.32□□□□□ -2.04
PRKNO60260 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.32□□□□□ -2.04
PRKNO60260 RPL17P19-201ENST00000489069 552 ntBASIC2.32□□□□□ -2.04
PRKNO60260 RNU6-976P-201ENST00000516086 111 ntBASIC2.32□□□□□ -2.04
PRKNO60260 ELOCP31-201ENST00000540463 467 ntBASIC2.32□□□□□ -2.04
PRKNO60260 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.32□□□□□ -2.04
PRKNO60260 SNRPGP17-201ENST00000603780 214 ntBASIC2.32□□□□□ -2.04
PRKNO60260 AL356157.2-201ENST00000605122 111 ntBASIC2.32□□□□□ -2.04
PRKNO60260 AL359198.2-201ENST00000611836 194 ntBASIC2.32□□□□□ -2.04
PRKNO60260 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.32□□□□□ -2.04
PRKNO60260 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.32□□□□□ -2.04
PRKNO60260 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRKNO60260 MTND4P27-201ENST00000450813 1354 ntBASIC2.32□□□□□ -2.04
PRKNO60260 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PRKNO60260 AC002543.1-201ENST00000299783 1954 ntBASIC2.31□□□□□ -2.04
PRKNO60260 RNU6-529P-201ENST00000363383 104 ntBASIC2.31□□□□□ -2.04
PRKNO60260 SNORA36A-201ENST00000384221 132 ntBASIC2.31□□□□□ -2.04
PRKNO60260 SNORA67.4-201ENST00000384688 142 ntBASIC2.31□□□□□ -2.04
PRKNO60260 AL590004.1-201ENST00000405321 300 ntBASIC2.31□□□□□ -2.04
PRKNO60260 EIF1AXP1-201ENST00000419267 435 ntBASIC2.31□□□□□ -2.04
PRKNO60260 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.31□□□□□ -2.04
PRKNO60260 MRPS18CP6-201ENST00000423587 223 ntBASIC2.31□□□□□ -2.04
PRKNO60260 AL513328.1-201ENST00000446460 224 ntBASIC2.31□□□□□ -2.04
PRKNO60260 AL353705.4-201ENST00000449661 238 ntBASIC2.31□□□□□ -2.04
PRKNO60260 RPL30P1-201ENST00000488676 339 ntBASIC2.31□□□□□ -2.04
PRKNO60260 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.31□□□□□ -2.04
PRKNO60260 AC016632.1-201ENST00000503994 196 ntBASIC2.31□□□□□ -2.04
PRKNO60260 AC105758.1-201ENST00000506038 399 ntBASIC2.31□□□□□ -2.04
PRKNO60260 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.31□□□□□ -2.04
PRKNO60260 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.31□□□□□ -2.04
PRKNO60260 MIR4765-201ENST00000585007 77 ntBASIC2.31□□□□□ -2.04
PRKNO60260 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.31□□□□□ -2.04
PRKNO60260 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.31□□□□□ -2.04
PRKNO60260 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.31□□□□□ -2.04
PRKNO60260 AL359854.1-201ENST00000614203 1594 ntBASIC2.31□□□□□ -2.04
PRKNO60260 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.3□□□□□ -2.04
PRKNO60260 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
PRKNO60260 RNA5SP289-201ENST00000362332 137 ntBASIC2.3□□□□□ -2.04
PRKNO60260 Y_RNA.40-201ENST00000362645 93 ntBASIC2.3□□□□□ -2.04
PRKNO60260 RNU6-1010P-201ENST00000362757 107 ntBASIC2.3□□□□□ -2.04
PRKNO60260 Y_RNA.112-201ENST00000363250 102 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms