Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC132479.1-201ENST00000449160 144 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC079140.5-201ENST00000507882 310 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 RNU6-1069P-201ENST00000516612 133 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 SNORA25.17-201ENST00000517184 124 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC106038.2-201ENST00000520706 568 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AP006587.4-201ENST00000526053 529 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AGGF1P4-201ENST00000568249 801 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC008088.1-201ENST00000580993 280 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 SNRPGP17-201ENST00000603780 214 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC091152.3-201ENST00000604227 325 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC064872.1-201ENST00000604823 1072 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC138749.5-201ENST00000611461 208 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC004223.4-201ENST00000612426 332 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC243829.6-201ENST00000612652 106 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC116165.2-201ENST00000616705 206 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AL159153.1-201ENST00000619688 317 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC068792.1-201ENST00000621354 417 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC138649.3-201ENST00000622154 254 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC008993.2-201ENST00000631744 806 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 RNU6-944P-201ENST00000364023 107 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 RNU6-259P-201ENST00000383999 107 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 SNORD116-9-201ENST00000384000 95 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 Y_RNA.412-201ENST00000384001 104 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 RNU6-142P-201ENST00000384019 107 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 RNU6-533P-201ENST00000384144 107 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 SNORD116-3-201ENST00000384287 95 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 SNORD116-7-201ENST00000384404 95 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 SNORD116-5-201ENST00000384462 95 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 SNORA26.8-201ENST00000391306 124 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 RNU2-29P-201ENST00000410423 189 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC069257.2-201ENST00000441819 155 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 GMFBP1-201ENST00000467831 427 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 MED28P2-201ENST00000475771 317 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC079382.1-201ENST00000493346 557 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC005741.1-201ENST00000511094 432 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AL356057.1-201ENST00000533798 831 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 ZNF321P-202ENST00000550843 495 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 MIR3923-201ENST00000579521 83 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC073539.2-201ENST00000597113 165 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 Z99497.2-201ENST00000603634 310 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AP000811.1-201ENST00000603803 651 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 HULC.1-201ENST00000612720 240 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 SEPT14P19-203ENST00000633205 211 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AP000568.1-201ENST00000282964 442 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 FGF7P2-201ENST00000332473 296 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 Y_RNA.1-201ENST00000352915 104 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 MIR10A-201ENST00000385043 110 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 OR9R1P-201ENST00000412200 877 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 EIF4EP4-201ENST00000424916 578 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC243964.1-201ENST00000441814 261 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC073415.1-201ENST00000449240 153 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 MTND1P27-201ENST00000451117 902 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC013470.1-201ENST00000453438 462 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC067942.3-201ENST00000512025 362 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 MTND4P7-201ENST00000523876 130 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 COPS8P3-201ENST00000526024 482 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 CYCSP27-201ENST00000527643 293 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC104383.1-201ENST00000530297 370 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC008521.1-201ENST00000587471 187 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 DPPA3P3-201ENST00000603842 430 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AL603755.1-201ENST00000619504 163 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC022418.1-201ENST00000624118 445 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC017037.3-201ENST00000625016 472 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 CBX3P1-201ENST00000325243 554 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 RNU6-82P-201ENST00000363970 107 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 RNY4P34-201ENST00000364779 95 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 Y_RNA.367-201ENST00000365544 101 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 RNU6-622P-201ENST00000384272 103 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 MIR544A-201ENST00000384855 91 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 MIR29B2-201ENST00000385055 81 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 SNORA26.3-201ENST00000391119 136 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AL031577.2-201ENST00000404133 280 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 RNA5SP511-201ENST00000410487 115 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AL591043.1-201ENST00000432461 424 ntBASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.75□□□□□ -2.29
COL6A6A6NMZ7 snoU13.14-201ENST00000459372 104 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms