Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.46□□□□□ -2.34
LYSMD1Q96S90 MIR3146-201ENST00000580367 79 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 AC022432.1-201ENST00000595739 310 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 AC068790.6-201ENST00000602558 258 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 AC026585.1-201ENST00000619582 524 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 AP002782.1-201ENST00000623107 614 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 AL356596.1-201ENST00000624230 379 ntBASIC0.46□□□□□ -2.34
LYSMD1Q96S90 RNA5SP361-201ENST00000362686 118 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 Y_RNA.124-201ENST00000363339 93 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 RNU6-527P-201ENST00000363425 104 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 RNU6-384P-201ENST00000364900 104 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 SNORA4.2-201ENST00000365313 147 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 RNU6-769P-201ENST00000384407 104 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 MIR605-201ENST00000385078 83 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 SNORA12.2-201ENST00000391040 156 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 RNU2-62P-201ENST00000410868 191 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.45□□□□□ -2.34
LYSMD1Q96S90 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.45□□□□□ -2.34
LYSMD1Q96S90 AC098934.3-201ENST00000430450 190 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 USP9YP14-201ENST00000430663 563 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.45□□□□□ -2.34
LYSMD1Q96S90 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.45□□□□□ -2.34
LYSMD1Q96S90 RPL39P38-201ENST00000467018 153 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 AC022447.4-201ENST00000504053 364 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.45□□□□□ -2.34
LYSMD1Q96S90 MTND3P5-201ENST00000512798 333 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 RNA5SP436-201ENST00000516020 115 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 AL121579.1-201ENST00000555129 305 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 AC021231.3-201ENST00000558497 370 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 AC109446.1-201ENST00000566172 220 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 BNIP3P16-201ENST00000589779 534 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 AC112191.3-201ENST00000604371 277 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 AC024060.1-201ENST00000607052 494 ntBASIC0.45□□□□□ -2.34
LYSMD1Q96S90 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.45□□□□□ -2.34
LYSMD1Q96S90 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.45□□□□□ -2.34
LYSMD1Q96S90 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
LYSMD1Q96S90 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
LYSMD1Q96S90 RNU6-78P-201ENST00000362897 107 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 RNU6-511P-201ENST00000363496 107 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 RNU6-413P-201ENST00000384115 107 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 Y_RNA.472-201ENST00000384322 102 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 MIR578-201ENST00000384828 96 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 MIR936-201ENST00000401264 98 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 AL136310.1-201ENST00000404926 654 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 BTBD7P2-201ENST00000441962 620 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 RPS27P22-201ENST00000478056 241 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 BET1P1-201ENST00000482276 359 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 COX6CP6-201ENST00000490840 228 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 RNU6-1041P-201ENST00000516254 102 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 AP002453.2-201ENST00000533503 320 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 AC023050.2-201ENST00000544968 387 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.44□□□□□ -2.34
LYSMD1Q96S90 BCRP9-201ENST00000605312 388 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 AC072039.2-201ENST00000608883 439 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 AC104465.1-201ENST00000611365 139 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 AC131159.1-201ENST00000621854 213 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 SNORD98-201ENST00000636377 67 ntBASIC0.44□□□□□ -2.34
LYSMD1Q96S90 AL391994.1-201ENST00000254724 282 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
LYSMD1Q96S90 SNORA63.3-201ENST00000362682 132 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 Y_RNA.192-201ENST00000363977 102 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 RNY1-201ENST00000364228 113 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 RNY4P16-201ENST00000364768 94 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 RNU6-110P-201ENST00000384508 104 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 RNA5SP193-201ENST00000410353 107 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.43□□□□□ -2.34
LYSMD1Q96S90 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.43□□□□□ -2.34
LYSMD1Q96S90 C1DP2-201ENST00000418167 426 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 RPS3AP37-201ENST00000419176 745 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.43□□□□□ -2.34
LYSMD1Q96S90 RNU6-496P-201ENST00000516145 99 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 RNA5SP121-201ENST00000516537 101 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 RNU6-229P-201ENST00000516614 102 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 AL590705.4-201ENST00000532209 134 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.43□□□□□ -2.34
LYSMD1Q96S90 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.43□□□□□ -2.34
LYSMD1Q96S90 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.43□□□□□ -2.34
LYSMD1Q96S90 AC105148.1-201ENST00000604961 409 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 AL359547.2-201ENST00000615810 418 ntBASIC0.43□□□□□ -2.34
LYSMD1Q96S90 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
LYSMD1Q96S90 AC023934.1-201ENST00000574529 2389 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 RNU6-1285P-201ENST00000363480 105 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 RNU6-723P-201ENST00000383973 107 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 RNU6-142P-201ENST00000384019 107 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 SNORD116-12-201ENST00000384468 92 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 MIR942-201ENST00000401111 86 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 AL445305.1-201ENST00000432577 575 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.42□□□□□ -2.34
LYSMD1Q96S90 AC007327.1-201ENST00000447461 264 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.42□□□□□ -2.34
LYSMD1Q96S90 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.42□□□□□ -2.34
LYSMD1Q96S90 AC116353.3-201ENST00000511215 249 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 RNU4-54P-201ENST00000516428 129 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 SUMO2P16-201ENST00000519475 264 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.42□□□□□ -2.34
LYSMD1Q96S90 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.42□□□□□ -2.34
LYSMD1Q96S90 AC123904.2-201ENST00000548059 300 ntBASIC0.42□□□□□ -2.34
LYSMD1Q96S90 ZNF321P-202ENST00000550843 495 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms