Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RNU4-9P-201ENST00000364951 139 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 SNORA46.1-201ENST00000391069 153 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 MIR208B-201ENST00000401172 77 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 AC112220.1-201ENST00000434628 355 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC138Q96M89 RPS29P26-201ENST00000477483 171 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 AF186996.7-201ENST00000492781 209 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 AC083906.5-201ENST00000503722 328 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.84□□□□□ -1.95
CCDC138Q96M89 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC138Q96M89 ELOCP31-201ENST00000540463 467 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 AC018630.3-201ENST00000542637 96 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 AC104984.5-201ENST00000586878 94 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 7SK.7-201ENST00000603504 247 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 SCARNA4-201ENST00000629045 128 ntBASIC2.84□□□□□ -1.95
CCDC138Q96M89 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC138Q96M89 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC138Q96M89 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC138Q96M89 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.84□□□□□ -1.96
CCDC138Q96M89 AC096644.4-201ENST00000563417 2912 ntBASIC2.84□□□□□ -1.96
CCDC138Q96M89 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC138Q96M89 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
CCDC138Q96M89 ZNF299P-201ENST00000406845 1804 ntBASIC2.84□□□□□ -1.96
CCDC138Q96M89 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC138Q96M89 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC138Q96M89 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC138Q96M89 RNU1-35P-201ENST00000362782 153 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 RNU1-23P-201ENST00000363361 144 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 RNU6-944P-201ENST00000364023 107 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 RNU6-546P-201ENST00000383991 107 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 RNU6-1297P-201ENST00000384415 104 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 SNORA44-201ENST00000384584 132 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 Y_RNA.533-201ENST00000384596 114 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 RN7SKP284-201ENST00000411002 343 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 AL358453.1-201ENST00000422522 250 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC138Q96M89 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC138Q96M89 snoU13.6-201ENST00000458785 104 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 AC087477.1-201ENST00000465747 340 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 UBE2DNL-203ENST00000474922 222 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 RPL7P42-201ENST00000481005 679 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC138Q96M89 SCGB1D5P-201ENST00000515134 247 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 RNU6-307P-201ENST00000516743 106 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 EIF4A1P12-201ENST00000551910 141 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC138Q96M89 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC138Q96M89 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC138Q96M89 MIR4658-201ENST00000584344 65 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 AC005899.2-201ENST00000584353 90 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 MIR6852-201ENST00000621699 66 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC138Q96M89 AL669831.3-213ENST00000636676 183 ntBASIC2.83□□□□□ -1.96
CCDC138Q96M89 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC138Q96M89 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC138Q96M89 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
CCDC138Q96M89 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC138Q96M89 RNU6-378P-201ENST00000384324 107 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 Y_RNA.490-201ENST00000384413 102 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CCDC138Q96M89 RNU6-1093P-201ENST00000391194 107 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 UBA52P6-201ENST00000399822 382 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 RNU2-41P-201ENST00000410991 178 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 RNU2-32P-201ENST00000411193 191 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 RPS26P42-201ENST00000413485 326 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 AC243428.1-201ENST00000421099 264 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 Z82209.1-201ENST00000422141 2135 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 USMG5P1-201ENST00000425964 177 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 SNRPEP8-201ENST00000442866 260 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 AP000705.1-201ENST00000454567 350 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 MTND3P22-201ENST00000510932 243 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC138Q96M89 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC138Q96M89 APOOP3-201ENST00000536787 586 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 AC022080.3-201ENST00000544433 482 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 AC004486.1-201ENST00000546846 233 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 FRG2DP-202ENST00000566967 323 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 AL355375.2-201ENST00000574825 175 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 AL158827.2-201ENST00000602494 330 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 AC090115.4-201ENST00000609970 188 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 AL691447.3-201ENST00000635020 330 ntBASIC2.82□□□□□ -1.96
CCDC138Q96M89 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC138Q96M89 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC138Q96M89 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CCDC138Q96M89 Y_RNA.48-201ENST00000362710 103 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 RNU6-1188P-201ENST00000363795 107 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 RNU6-595P-201ENST00000363944 107 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 SNORD32B-201ENST00000364460 84 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 Y_RNA.404-201ENST00000383978 102 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 AL590004.2-201ENST00000404787 371 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 MIR1294-201ENST00000408503 142 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC138Q96M89 AL451074.5-201ENST00000415894 435 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC138Q96M89 AC009238.1-201ENST00000442165 424 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 AC009237.6-201ENST00000446969 424 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 OR2AQ1P-201ENST00000451972 200 ntBASIC2.81□□□□□ -1.96
CCDC138Q96M89 RN7SKP210-201ENST00000459176 261 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms