Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 RPL31P3-201ENST00000458430 332 ntBASIC1.22□□□□□ -2.21
APH1AQ96BI3 AC007547.1-201ENST00000462177 490 ntBASIC1.22□□□□□ -2.21
APH1AQ96BI3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.22□□□□□ -2.21
APH1AQ96BI3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.22□□□□□ -2.21
APH1AQ96BI3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.22□□□□□ -2.21
APH1AQ96BI3 MIR3923-201ENST00000579521 83 ntBASIC1.22□□□□□ -2.21
APH1AQ96BI3 AP001485.1-201ENST00000604799 199 ntBASIC1.22□□□□□ -2.21
APH1AQ96BI3 AC024933.1-201ENST00000608472 348 ntBASIC1.22□□□□□ -2.21
APH1AQ96BI3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.22□□□□□ -2.21
APH1AQ96BI3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
APH1AQ96BI3 AC091304.6-201ENST00000619761 202 ntBASIC1.22□□□□□ -2.21
APH1AQ96BI3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.22□□□□□ -2.21
APH1AQ96BI3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.22□□□□□ -2.21
APH1AQ96BI3 MTND4P14-201ENST00000435799 1354 ntBASIC1.21□□□□□ -2.21
APH1AQ96BI3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
APH1AQ96BI3 RNU1-62P-201ENST00000362599 164 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 U3.9-201ENST00000363823 204 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 RNU6-203P-201ENST00000384038 104 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 Y_RNA.480-201ENST00000384364 102 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 MIR520A-201ENST00000384862 85 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 SNORA12.2-201ENST00000391040 156 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 FGF7P8-201ENST00000402994 292 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.21□□□□□ -2.22
APH1AQ96BI3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.21□□□□□ -2.22
APH1AQ96BI3 HIGD1AP15-201ENST00000416198 280 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 MTND3P17-201ENST00000416968 344 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
APH1AQ96BI3 FTH1P12-201ENST00000432137 551 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 AC009961.2-201ENST00000435771 251 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
APH1AQ96BI3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.21□□□□□ -2.22
APH1AQ96BI3 AC016925.1-201ENST00000458303 298 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 RNU7-125P-201ENST00000458760 62 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 RNU7-182P-201ENST00000459009 62 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 RPL9P9-202ENST00000466501 579 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.21□□□□□ -2.22
APH1AQ96BI3 AC108078.1-201ENST00000508073 725 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.21□□□□□ -2.22
APH1AQ96BI3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.21□□□□□ -2.22
APH1AQ96BI3 LRRC34P2-201ENST00000514850 553 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 HSPE1P4-201ENST00000550617 308 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 AL160236.1-201ENST00000556317 195 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.21□□□□□ -2.22
APH1AQ96BI3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.21□□□□□ -2.22
APH1AQ96BI3 AC009094.1-201ENST00000564443 426 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 AC109446.1-201ENST00000566172 220 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 AC005668.1-201ENST00000571142 476 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.21□□□□□ -2.22
APH1AQ96BI3 AC069114.2-201ENST00000604699 304 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 MIR7974-201ENST00000615835 79 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 uc_338.11-201ENST00000619132 160 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 AC022418.1-201ENST00000624118 445 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 SEPT14P19-203ENST00000633205 211 ntBASIC1.21□□□□□ -2.22
APH1AQ96BI3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.21□□□□□ -2.22
APH1AQ96BI3 RNU6-1097P-201ENST00000363586 107 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 SNORD1A-201ENST00000364968 72 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 SNORD31B-201ENST00000364977 69 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 RNU6-438P-201ENST00000365561 103 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 RNU2-41P-201ENST00000410991 178 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 MTCO1P21-201ENST00000416634 589 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 AC013410.2-201ENST00000422627 201 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 SDAD1P3-201ENST00000427380 333 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 AC245047.4-201ENST00000433189 144 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 AC099677.2-201ENST00000436385 175 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 AL603825.1-201ENST00000438481 80 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 HSPE1P9-201ENST00000440046 311 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 AC027119.1-201ENST00000440877 241 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 TOMM22P6-201ENST00000465035 409 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 AL163540.1-201ENST00000485382 386 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.2□□□□□ -2.22
APH1AQ96BI3 RNU6-232P-201ENST00000517144 64 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 AP001372.4-201ENST00000524889 472 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.2□□□□□ -2.22
APH1AQ96BI3 AC012414.6-201ENST00000568241 401 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 AC091805.2-201ENST00000603848 235 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 AC107304.1-201ENST00000604229 296 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 RPL17P51-201ENST00000605218 238 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 MIR98-201ENST00000606724 119 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 snoU13.31-201ENST00000607291 104 ntBASIC1.2□□□□□ -2.22
APH1AQ96BI3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.2□□□□□ -2.22
APH1AQ96BI3 ICE2P2-201ENST00000483823 2787 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
APH1AQ96BI3 SNORA72.3-201ENST00000365074 132 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 RNU6-1029P-201ENST00000384109 107 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 MIR1-2-201ENST00000384961 85 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 SNORA40.3-201ENST00000390964 122 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 HMGN1P14-201ENST00000412459 517 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.19□□□□□ -2.22
APH1AQ96BI3 AL161935.2-201ENST00000414627 60 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 EBAG9P1-201ENST00000418955 543 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 RPS27P16-201ENST00000425758 201 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 RPL31P35-201ENST00000431058 377 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 MTND1P18-201ENST00000448191 573 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.19□□□□□ -2.22
APH1AQ96BI3 AL033528.1-201ENST00000453780 140 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 RPL36AP21-201ENST00000490372 323 ntBASIC1.19□□□□□ -2.22
APH1AQ96BI3 AC079382.1-201ENST00000493346 557 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms