Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.77□□□□□ -1.97
HMGB4Q8WW32 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
HMGB4Q8WW32 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.77□□□□□ -1.97
HMGB4Q8WW32 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HMGB4Q8WW32 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.76□□□□□ -1.97
HMGB4Q8WW32 MTND4P27-201ENST00000450813 1354 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AC233981.2-201ENST00000611524 1614 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HMGB4Q8WW32 Y_RNA.48-201ENST00000362710 103 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 DYNLT3P1-201ENST00000378574 347 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 RNU6-890P-201ENST00000384121 107 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 SNORA41-201ENST00000384675 132 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 MIR1261-201ENST00000408659 82 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 RN7SKP58-201ENST00000411010 305 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AL513328.1-201ENST00000446460 224 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AC073901.1-201ENST00000462471 408 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AC023141.11-201ENST00000508864 202 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AC008413.1-201ENST00000511864 177 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AC096725.1-201ENST00000514266 313 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 RNU6-307P-201ENST00000516743 106 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 RNU6-56P-201ENST00000516986 93 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AC090616.3-201ENST00000582184 217 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.76□□□□□ -1.97
HMGB4Q8WW32 ZNF861P-201ENST00000588126 639 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 RPL30P11-203ENST00000598995 310 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AC005014.2-201ENST00000607795 599 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AC069294.1-201ENST00000608397 350 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AC133104.2-201ENST00000615272 193 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 MIR6817-201ENST00000615588 66 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 ZNF299P-201ENST00000406845 1804 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 AC092593.1-201ENST00000515413 1815 ntBASIC2.76□□□□□ -1.97
HMGB4Q8WW32 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HMGB4Q8WW32 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HMGB4Q8WW32 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
HMGB4Q8WW32 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
HMGB4Q8WW32 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
HMGB4Q8WW32 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HMGB4Q8WW32 Y_RNA.11-201ENST00000362375 109 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 RNU1-35P-201ENST00000362782 153 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 RNU5B-2P-201ENST00000363036 113 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 RNA5SP68-201ENST00000363885 119 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 Y_RNA.187-201ENST00000363918 113 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 RNU6-595P-201ENST00000363944 107 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 Y_RNA.419-201ENST00000384041 102 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 Y_RNA.431-201ENST00000384086 102 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 Y_RNA.460-201ENST00000384255 102 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.75□□□□□ -1.97
HMGB4Q8WW32 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.75□□□□□ -1.97
HMGB4Q8WW32 AC104332.2-201ENST00000429959 156 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.75□□□□□ -1.97
HMGB4Q8WW32 AC011816.1-201ENST00000441346 546 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 AC140059.1-201ENST00000489238 361 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 SNORA31.26-201ENST00000517250 137 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 AC093249.1-201ENST00000567049 203 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 MIR3117-201ENST00000584034 78 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 MIR3616-201ENST00000584070 92 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.75□□□□□ -1.97
HMGB4Q8WW32 AL356280.1-201ENST00000603614 379 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 AL034555.1-201ENST00000604816 211 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 AC069234.5-201ENST00000611056 416 ntBASIC2.75□□□□□ -1.97
HMGB4Q8WW32 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.75□□□□□ -1.97
HMGB4Q8WW32 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HMGB4Q8WW32 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HMGB4Q8WW32 Y_RNA.315-201ENST00000365117 102 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 RNU6-220P-201ENST00000390919 107 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 RPS20P15-201ENST00000412792 311 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AL358453.1-201ENST00000422522 250 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AL353705.4-201ENST00000449661 238 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AL353752.1-201ENST00000454946 260 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 RPS3P1-201ENST00000456781 192 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 RPL23AP75-201ENST00000491601 451 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AF186996.7-201ENST00000492781 209 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 HMGN1P13-201ENST00000505795 138 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 RNA5SP385-201ENST00000515947 110 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 RNA5SP148-201ENST00000516527 94 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGB4Q8WW32 Z98751.3-201ENST00000604447 521 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 RPL23AP88-201ENST00000605759 454 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AL160413.1-201ENST00000622780 310 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AC090574.1-201ENST00000623186 233 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 SCARNA4-201ENST00000629045 128 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGB4Q8WW32 AC108206.1-201ENST00000570186 4159 ntBASIC2.74□□□□□ -1.97
HMGB4Q8WW32 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
HMGB4Q8WW32 AL161431.1-201ENST00000618966 4205 ntBASIC2.73□□□□□ -1.97
HMGB4Q8WW32 MTND5P10-201ENST00000603719 1809 ntBASIC2.73□□□□□ -1.97
HMGB4Q8WW32 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HMGB4Q8WW32 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGB4Q8WW32 XGY1-201ENST00000381172 446 ntBASIC2.73□□□□□ -1.97
HMGB4Q8WW32 Y_RNA.579-201ENST00000390939 94 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms