Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC118273.2-201ENST00000532092 465 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.78□□□□□ -1.96
USP38Q8NB14 MIR1273D-201ENST00000577266 86 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 AC091135.1-201ENST00000585943 307 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 AC060766.3-201ENST00000591442 263 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.78□□□□□ -1.96
USP38Q8NB14 VN1R107P-201ENST00000601784 209 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 AL022345.1-201ENST00000607292 135 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 AC019193.3-201ENST00000609144 554 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 AC009541.1-201ENST00000438279 2662 ntBASIC2.78□□□□□ -1.96
USP38Q8NB14 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.78□□□□□ -1.96
USP38Q8NB14 MIR6073-201ENST00000352083 89 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 Y_RNA.135-201ENST00000363439 95 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 Y_RNA.303-201ENST00000364998 94 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 Y_RNA.504-201ENST00000384481 104 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 AL359511.1-201ENST00000402970 211 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 U6atac.2-201ENST00000408644 118 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 RN7SKP32-201ENST00000410167 303 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 MTND4LP11-201ENST00000422184 280 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 AC008267.5-201ENST00000424928 265 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 AL356320.1-201ENST00000429616 163 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 AL645568.3-201ENST00000433683 316 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.77□□□□□ -1.97
USP38Q8NB14 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
USP38Q8NB14 AL353572.1-201ENST00000442490 417 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.77□□□□□ -1.97
USP38Q8NB14 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.77□□□□□ -1.97
USP38Q8NB14 RN7SKP210-201ENST00000459176 261 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 RN7SL636P-201ENST00000497504 294 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 HMGN1P12-201ENST00000499125 195 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 RNU1-104P-201ENST00000517280 175 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 AC109329.1-201ENST00000518744 317 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.77□□□□□ -1.97
USP38Q8NB14 MIR4498-201ENST00000577599 66 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 MIR3616-201ENST00000584070 92 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 AC243960.4-201ENST00000600532 288 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 AL049779.4-201ENST00000604500 156 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.77□□□□□ -1.97
USP38Q8NB14 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 MIR6128-201ENST00000615528 109 ntBASIC2.77□□□□□ -1.97
USP38Q8NB14 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.77□□□□□ -1.97
USP38Q8NB14 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
USP38Q8NB14 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
USP38Q8NB14 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
USP38Q8NB14 RNU6-1032P-201ENST00000384100 107 ntBASIC2.76□□□□□ -1.97
USP38Q8NB14 MIR517A-201ENST00000385001 87 ntBASIC2.76□□□□□ -1.97
USP38Q8NB14 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
USP38Q8NB14 MIR548F5-201ENST00000408421 86 ntBASIC2.76□□□□□ -1.97
USP38Q8NB14 AC007064.1-201ENST00000412238 351 ntBASIC2.76□□□□□ -1.97
USP38Q8NB14 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.76□□□□□ -1.97
USP38Q8NB14 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.76□□□□□ -1.97
USP38Q8NB14 AC244670.1-201ENST00000436879 112 ntBASIC2.76□□□□□ -1.97
USP38Q8NB14 AC104389.3-201ENST00000445629 235 ntBASIC2.76□□□□□ -1.97
USP38Q8NB14 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.76□□□□□ -1.97
USP38Q8NB14 AC103851.1-201ENST00000506833 274 ntBASIC2.76□□□□□ -1.97
USP38Q8NB14 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
USP38Q8NB14 AC091874.1-201ENST00000511402 339 ntBASIC2.76□□□□□ -1.97
USP38Q8NB14 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.76□□□□□ -1.97
USP38Q8NB14 RNU1-54P-201ENST00000517181 120 ntBASIC2.76□□□□□ -1.97
USP38Q8NB14 AC093249.1-201ENST00000567049 203 ntBASIC2.76□□□□□ -1.97
USP38Q8NB14 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
USP38Q8NB14 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.75□□□□□ -1.97
USP38Q8NB14 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
USP38Q8NB14 snoU2_19.1-201ENST00000362361 80 ntBASIC2.75□□□□□ -1.97
USP38Q8NB14 RNU6-227P-201ENST00000362865 103 ntBASIC2.75□□□□□ -1.97
USP38Q8NB14 Y_RNA.123-201ENST00000363338 102 ntBASIC2.75□□□□□ -1.97
USP38Q8NB14 RNU6-1210P-201ENST00000363775 107 ntBASIC2.75□□□□□ -1.97
USP38Q8NB14 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
USP38Q8NB14 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.75□□□□□ -1.97
USP38Q8NB14 AL121594.1-201ENST00000475906 575 ntBASIC2.75□□□□□ -1.97
USP38Q8NB14 AC114801.2-201ENST00000503825 781 ntBASIC2.75□□□□□ -1.97
USP38Q8NB14 SNORA31.15-201ENST00000516771 132 ntBASIC2.75□□□□□ -1.97
USP38Q8NB14 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.75□□□□□ -1.97
USP38Q8NB14 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.75□□□□□ -1.97
USP38Q8NB14 POLR3GP2-201ENST00000588366 668 ntBASIC2.75□□□□□ -1.97
USP38Q8NB14 uc_338.5-201ENST00000611839 155 ntBASIC2.75□□□□□ -1.97
USP38Q8NB14 AC022306.2-201ENST00000617563 647 ntBASIC2.75□□□□□ -1.97
USP38Q8NB14 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.75□□□□□ -1.97
USP38Q8NB14 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.75□□□□□ -1.97
USP38Q8NB14 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
USP38Q8NB14 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
USP38Q8NB14 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
USP38Q8NB14 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
USP38Q8NB14 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
USP38Q8NB14 Y_RNA.184-201ENST00000363884 108 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 RNU6-1141P-201ENST00000364520 107 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 SNORA67.1-201ENST00000364749 141 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 SNORD81.2-201ENST00000365153 76 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 RNA5SP213-201ENST00000391031 106 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AP000275.1-201ENST00000411943 390 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 PDCL2P1-201ENST00000419302 352 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AL590135.1-201ENST00000422215 156 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AC019205.3-201ENST00000424573 156 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.74□□□□□ -1.97
USP38Q8NB14 GPM6BP3-201ENST00000442797 145 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AC096638.1-201ENST00000444678 216 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AC016700.2-201ENST00000446011 156 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.74□□□□□ -1.97
USP38Q8NB14 AC107399.1-201ENST00000451226 265 ntBASIC2.74□□□□□ -1.97
USP38Q8NB14 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms