Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 Z69720.2-201ENST00000624755 279 ntBASIC0.68□□□□□ -2.3
TPM4P67936 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.68□□□□□ -2.3
TPM4P67936 RNU1-76P-201ENST00000362903 159 ntBASIC0.67□□□□□ -2.3
TPM4P67936 SNORD56.2-201ENST00000363242 71 ntBASIC0.67□□□□□ -2.3
TPM4P67936 Y_RNA.124-201ENST00000363339 93 ntBASIC0.67□□□□□ -2.3
TPM4P67936 RNU2-72P-201ENST00000411175 163 ntBASIC0.67□□□□□ -2.3
TPM4P67936 MTATP6P20-201ENST00000414147 562 ntBASIC0.67□□□□□ -2.3
TPM4P67936 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.67□□□□□ -2.3
TPM4P67936 AC060773.1-201ENST00000421698 310 ntBASIC0.67□□□□□ -2.3
TPM4P67936 AC010975.2-201ENST00000427781 588 ntBASIC0.67□□□□□ -2.3
TPM4P67936 AC011406.1-201ENST00000512440 370 ntBASIC0.67□□□□□ -2.3
TPM4P67936 RNA5SP384-201ENST00000516615 116 ntBASIC0.67□□□□□ -2.3
TPM4P67936 SUMO2P16-201ENST00000519475 264 ntBASIC0.67□□□□□ -2.3
TPM4P67936 AC022616.6-201ENST00000520479 119 ntBASIC0.67□□□□□ -2.3
TPM4P67936 AP000889.1-201ENST00000530968 660 ntBASIC0.67□□□□□ -2.3
TPM4P67936 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.67□□□□□ -2.3
TPM4P67936 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.67□□□□□ -2.3
TPM4P67936 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.67□□□□□ -2.3
TPM4P67936 MTND3P19-201ENST00000603825 345 ntBASIC0.67□□□□□ -2.3
TPM4P67936 AC136475.10-201ENST00000620253 385 ntBASIC0.67□□□□□ -2.3
TPM4P67936 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
TPM4P67936 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
TPM4P67936 SNORA72.2-201ENST00000365028 127 ntBASIC0.66□□□□□ -2.3
TPM4P67936 RNU6-877P-201ENST00000383868 107 ntBASIC0.66□□□□□ -2.3
TPM4P67936 RNU6-1026P-201ENST00000384465 108 ntBASIC0.66□□□□□ -2.3
TPM4P67936 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
TPM4P67936 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TPM4P67936 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.66□□□□□ -2.3
TPM4P67936 SNRPGP7-201ENST00000469016 106 ntBASIC0.66□□□□□ -2.3
TPM4P67936 AL590705.4-201ENST00000532209 134 ntBASIC0.66□□□□□ -2.3
TPM4P67936 AL121579.1-201ENST00000555129 305 ntBASIC0.66□□□□□ -2.3
TPM4P67936 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.66□□□□□ -2.3
TPM4P67936 AC105148.1-201ENST00000604961 409 ntBASIC0.66□□□□□ -2.3
TPM4P67936 RPL17P51-201ENST00000605218 238 ntBASIC0.66□□□□□ -2.3
TPM4P67936 AL158211.2-201ENST00000607282 395 ntBASIC0.66□□□□□ -2.3
TPM4P67936 snoU13.31-201ENST00000607291 104 ntBASIC0.66□□□□□ -2.3
TPM4P67936 AL157786.1-207ENST00000627771 695 ntBASIC0.66□□□□□ -2.3
TPM4P67936 MIR338-201ENST00000636369 67 ntBASIC0.66□□□□□ -2.3
TPM4P67936 Y_RNA.132-201ENST00000363421 102 ntBASIC0.65□□□□□ -2.31
TPM4P67936 RNU2-3P-201ENST00000410144 191 ntBASIC0.65□□□□□ -2.31
TPM4P67936 RNU6-1054P-201ENST00000411293 104 ntBASIC0.65□□□□□ -2.31
TPM4P67936 HMGN1P14-201ENST00000412459 517 ntBASIC0.65□□□□□ -2.31
TPM4P67936 RPS3AP1-201ENST00000413190 320 ntBASIC0.65□□□□□ -2.31
TPM4P67936 C1DP2-201ENST00000418167 426 ntBASIC0.65□□□□□ -2.31
TPM4P67936 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.65□□□□□ -2.31
TPM4P67936 MTND1P18-201ENST00000448191 573 ntBASIC0.65□□□□□ -2.31
TPM4P67936 MTND3P25-201ENST00000509243 135 ntBASIC0.65□□□□□ -2.31
TPM4P67936 AC067942.3-201ENST00000512025 362 ntBASIC0.65□□□□□ -2.31
TPM4P67936 AC025423.5-201ENST00000550230 219 ntBASIC0.65□□□□□ -2.31
TPM4P67936 EIF4A1P12-201ENST00000551910 141 ntBASIC0.65□□□□□ -2.31
TPM4P67936 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.65□□□□□ -2.31
TPM4P67936 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.65□□□□□ -2.31
TPM4P67936 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
TPM4P67936 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TPM4P67936 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
TPM4P67936 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
TPM4P67936 RNU6-293P-201ENST00000411259 106 ntBASIC0.64□□□□□ -2.31
TPM4P67936 RNU6-607P-201ENST00000411283 108 ntBASIC0.64□□□□□ -2.31
TPM4P67936 RPS26P5-201ENST00000418544 335 ntBASIC0.64□□□□□ -2.31
TPM4P67936 AC078809.1-201ENST00000427601 140 ntBASIC0.64□□□□□ -2.31
TPM4P67936 CALM2P2-201ENST00000428512 440 ntBASIC0.64□□□□□ -2.31
TPM4P67936 AL358794.1-201ENST00000445689 381 ntBASIC0.64□□□□□ -2.31
TPM4P67936 AC048334.1-201ENST00000477975 159 ntBASIC0.64□□□□□ -2.31
TPM4P67936 AL163973.1-201ENST00000484753 577 ntBASIC0.64□□□□□ -2.31
TPM4P67936 HMGN1P7-201ENST00000491722 313 ntBASIC0.64□□□□□ -2.31
TPM4P67936 HMGN1P12-201ENST00000499125 195 ntBASIC0.64□□□□□ -2.31
TPM4P67936 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TPM4P67936 SNORD79.1-201ENST00000516069 84 ntBASIC0.64□□□□□ -2.31
TPM4P67936 RNA5SP337-201ENST00000517007 109 ntBASIC0.64□□□□□ -2.31
TPM4P67936 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.64□□□□□ -2.31
TPM4P67936 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.64□□□□□ -2.31
TPM4P67936 BNIP3P16-201ENST00000589779 534 ntBASIC0.64□□□□□ -2.31
TPM4P67936 AC080013.3-201ENST00000606839 578 ntBASIC0.64□□□□□ -2.31
TPM4P67936 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
TPM4P67936 MTND4P16-201ENST00000466108 1367 ntBASIC0.64□□□□□ -2.31
TPM4P67936 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.64□□□□□ -2.31
TPM4P67936 AC018630.2-201ENST00000534866 2403 ntBASIC0.64□□□□□ -2.31
TPM4P67936 SNORA24.1-201ENST00000384401 135 ntBASIC0.63□□□□□ -2.31
TPM4P67936 RNU6-692P-201ENST00000384496 107 ntBASIC0.63□□□□□ -2.31
TPM4P67936 SNORA26.3-201ENST00000391119 136 ntBASIC0.63□□□□□ -2.31
TPM4P67936 RNA5SP111-201ENST00000411386 101 ntBASIC0.63□□□□□ -2.31
TPM4P67936 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.63□□□□□ -2.31
TPM4P67936 RPL23AP95-201ENST00000426806 265 ntBASIC0.63□□□□□ -2.31
TPM4P67936 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
TPM4P67936 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.63□□□□□ -2.31
TPM4P67936 RAP1BP2-201ENST00000478270 544 ntBASIC0.63□□□□□ -2.31
TPM4P67936 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.63□□□□□ -2.31
TPM4P67936 AC008521.1-201ENST00000587471 187 ntBASIC0.63□□□□□ -2.31
TPM4P67936 AC073539.2-201ENST00000597113 165 ntBASIC0.63□□□□□ -2.31
TPM4P67936 AC021506.2-201ENST00000612354 169 ntBASIC0.63□□□□□ -2.31
TPM4P67936 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.62□□□□□ -2.31
TPM4P67936 MIR373-201ENST00000362273 69 ntBASIC0.62□□□□□ -2.31
TPM4P67936 RNA5SP361-201ENST00000362686 118 ntBASIC0.62□□□□□ -2.31
TPM4P67936 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.62□□□□□ -2.31
TPM4P67936 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.62□□□□□ -2.31
TPM4P67936 AC011233.1-201ENST00000422812 283 ntBASIC0.62□□□□□ -2.31
TPM4P67936 Z82205.1-201ENST00000428456 297 ntBASIC0.62□□□□□ -2.31
TPM4P67936 MTND3P1-201ENST00000441336 220 ntBASIC0.62□□□□□ -2.31
TPM4P67936 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.62□□□□□ -2.31
TPM4P67936 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms