Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RPL23AP70-201ENST00000483361 460 ntBASIC2.19□□□□□ -2.06
SHC1P29353 AC022493.2-201ENST00000506122 481 ntBASIC2.19□□□□□ -2.06
SHC1P29353 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.19□□□□□ -2.06
SHC1P29353 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.19□□□□□ -2.06
SHC1P29353 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.19□□□□□ -2.06
SHC1P29353 RNU6-327P-201ENST00000516270 127 ntBASIC2.19□□□□□ -2.06
SHC1P29353 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
SHC1P29353 RNU6-699P-201ENST00000517081 110 ntBASIC2.19□□□□□ -2.06
SHC1P29353 AC025281.1-201ENST00000567026 265 ntBASIC2.19□□□□□ -2.06
SHC1P29353 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.19□□□□□ -2.06
SHC1P29353 AC009314.1-201ENST00000603871 304 ntBASIC2.19□□□□□ -2.06
SHC1P29353 AC016925.2-201ENST00000605108 242 ntBASIC2.19□□□□□ -2.06
SHC1P29353 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.19□□□□□ -2.06
SHC1P29353 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.19□□□□□ -2.06
SHC1P29353 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.19□□□□□ -2.06
SHC1P29353 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SHC1P29353 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
SHC1P29353 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.19□□□□□ -2.06
SHC1P29353 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SHC1P29353 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
SHC1P29353 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SHC1P29353 RNU6-78P-201ENST00000362897 107 ntBASIC2.18□□□□□ -2.06
SHC1P29353 SNORA68.1-201ENST00000364537 132 ntBASIC2.18□□□□□ -2.06
SHC1P29353 RNU6-596P-201ENST00000365395 98 ntBASIC2.18□□□□□ -2.06
SHC1P29353 SNORA67.4-201ENST00000384688 142 ntBASIC2.18□□□□□ -2.06
SHC1P29353 SNORA11.2-201ENST00000408318 127 ntBASIC2.18□□□□□ -2.06
SHC1P29353 U3.37-201ENST00000408528 213 ntBASIC2.18□□□□□ -2.06
SHC1P29353 RPL26P27-201ENST00000414397 437 ntBASIC2.18□□□□□ -2.06
SHC1P29353 AL160004.2-201ENST00000432935 350 ntBASIC2.18□□□□□ -2.06
SHC1P29353 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.18□□□□□ -2.06
SHC1P29353 AL035666.1-201ENST00000446195 348 ntBASIC2.18□□□□□ -2.06
SHC1P29353 AL513328.1-201ENST00000446460 224 ntBASIC2.18□□□□□ -2.06
SHC1P29353 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.18□□□□□ -2.06
SHC1P29353 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.18□□□□□ -2.06
SHC1P29353 RNU6-377P-201ENST00000515965 102 ntBASIC2.18□□□□□ -2.06
SHC1P29353 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.18□□□□□ -2.06
SHC1P29353 PRELID2P1-201ENST00000552837 301 ntBASIC2.18□□□□□ -2.06
SHC1P29353 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.18□□□□□ -2.06
SHC1P29353 AC109446.1-201ENST00000566172 220 ntBASIC2.18□□□□□ -2.06
SHC1P29353 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.18□□□□□ -2.06
SHC1P29353 HMGN2P15-201ENST00000585707 270 ntBASIC2.18□□□□□ -2.06
SHC1P29353 AL355598.1-201ENST00000604169 202 ntBASIC2.18□□□□□ -2.06
SHC1P29353 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.18□□□□□ -2.06
SHC1P29353 AC133104.2-201ENST00000615272 193 ntBASIC2.18□□□□□ -2.06
SHC1P29353 MTND4P1-201ENST00000457501 1466 ntBASIC2.18□□□□□ -2.06
SHC1P29353 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHC1P29353 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SHC1P29353 RNU4-82P-201ENST00000362443 140 ntBASIC2.17□□□□□ -2.06
SHC1P29353 RNU6-490P-201ENST00000362985 107 ntBASIC2.17□□□□□ -2.06
SHC1P29353 Y_RNA.148-201ENST00000363557 117 ntBASIC2.17□□□□□ -2.06
SHC1P29353 RNU6-461P-201ENST00000364195 107 ntBASIC2.17□□□□□ -2.06
SHC1P29353 RNU6-336P-201ENST00000364891 107 ntBASIC2.17□□□□□ -2.06
SHC1P29353 RNU5E-7P-201ENST00000365290 117 ntBASIC2.17□□□□□ -2.06
SHC1P29353 SNORA41-201ENST00000384675 132 ntBASIC2.17□□□□□ -2.06
SHC1P29353 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.17□□□□□ -2.06
SHC1P29353 RPS29P13-201ENST00000402041 169 ntBASIC2.17□□□□□ -2.06
SHC1P29353 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.17□□□□□ -2.06
SHC1P29353 BPY2DP-201ENST00000422208 265 ntBASIC2.17□□□□□ -2.06
SHC1P29353 MRPS18CP6-201ENST00000423587 223 ntBASIC2.17□□□□□ -2.06
SHC1P29353 TOMM20P4-201ENST00000427861 435 ntBASIC2.17□□□□□ -2.06
SHC1P29353 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.17□□□□□ -2.06
SHC1P29353 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.17□□□□□ -2.06
SHC1P29353 AC104389.3-201ENST00000445629 235 ntBASIC2.17□□□□□ -2.06
SHC1P29353 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.17□□□□□ -2.06
SHC1P29353 MTND4P19-201ENST00000446659 478 ntBASIC2.17□□□□□ -2.06
SHC1P29353 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.17□□□□□ -2.06
SHC1P29353 BTF3P15-201ENST00000455606 336 ntBASIC2.17□□□□□ -2.06
SHC1P29353 AC022447.4-201ENST00000504053 364 ntBASIC2.17□□□□□ -2.06
SHC1P29353 AK3P2-201ENST00000507976 429 ntBASIC2.17□□□□□ -2.06
SHC1P29353 AC107222.1-201ENST00000510899 637 ntBASIC2.17□□□□□ -2.06
SHC1P29353 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.17□□□□□ -2.06
SHC1P29353 RNU6-976P-201ENST00000516086 111 ntBASIC2.17□□□□□ -2.06
SHC1P29353 SNORA43.2-201ENST00000516652 128 ntBASIC2.17□□□□□ -2.06
SHC1P29353 RPPH1-2P-201ENST00000516688 293 ntBASIC2.17□□□□□ -2.06
SHC1P29353 RN7SKP295-201ENST00000517264 153 ntBASIC2.17□□□□□ -2.06
SHC1P29353 AC109479.2-201ENST00000517842 174 ntBASIC2.17□□□□□ -2.06
SHC1P29353 CBX3P8-201ENST00000532412 525 ntBASIC2.17□□□□□ -2.06
SHC1P29353 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.17□□□□□ -2.06
SHC1P29353 AC007336.1-201ENST00000576365 3828 ntBASIC2.17□□□□□ -2.06
SHC1P29353 AC090616.3-201ENST00000582184 217 ntBASIC2.17□□□□□ -2.06
SHC1P29353 AC046143.2-201ENST00000609789 160 ntBASIC2.17□□□□□ -2.06
SHC1P29353 AC007485.1-201ENST00000616755 206 ntBASIC2.17□□□□□ -2.06
SHC1P29353 MIR6134-201ENST00000617606 109 ntBASIC2.17□□□□□ -2.06
SHC1P29353 AC091925.1-201ENST00000623204 462 ntBASIC2.17□□□□□ -2.06
SHC1P29353 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.17□□□□□ -2.06
SHC1P29353 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHC1P29353 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.16□□□□□ -2.06
SHC1P29353 Y_RNA.252-201ENST00000364556 101 ntBASIC2.16□□□□□ -2.06
SHC1P29353 RNY1P14-201ENST00000384426 108 ntBASIC2.16□□□□□ -2.06
SHC1P29353 RNU6-1160P-201ENST00000384546 104 ntBASIC2.16□□□□□ -2.06
SHC1P29353 MIR521-1-201ENST00000384902 87 ntBASIC2.16□□□□□ -2.06
SHC1P29353 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHC1P29353 AC023141.4-201ENST00000412031 328 ntBASIC2.16□□□□□ -2.06
SHC1P29353 NDUFS5P4-201ENST00000412983 318 ntBASIC2.16□□□□□ -2.06
SHC1P29353 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.16□□□□□ -2.06
SHC1P29353 AC113618.1-201ENST00000416747 285 ntBASIC2.16□□□□□ -2.06
SHC1P29353 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.16□□□□□ -2.06
SHC1P29353 MTND3P9-201ENST00000429526 346 ntBASIC2.16□□□□□ -2.06
SHC1P29353 RPS15AP10-201ENST00000432472 382 ntBASIC2.16□□□□□ -2.06
SHC1P29353 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms