Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 TPT1P8-201ENST00000510120 555 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 RNU5F-2P-201ENST00000516066 82 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 RNU6-685P-201ENST00000517088 95 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AC068587.5-201ENST00000528506 175 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AC008269.2-201ENST00000561915 1105 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 MIR5692A1-201ENST00000580523 69 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AC091135.1-201ENST00000585943 307 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 CYP2C61P-201ENST00000604072 290 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AC016925.2-201ENST00000605108 242 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AL451064.1-201ENST00000607718 471 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AC091304.9-201ENST00000612091 226 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 MIR7844-201ENST00000616161 122 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AL590240.4-201ENST00000616908 390 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 AL109933.3-201ENST00000619095 188 ntBASIC1.31□□□□□ -2.2
NPHP4O75161 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.31□□□□□ -2.2
NPHP4O75161 SNORD114-23-201ENST00000363536 72 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 RNA5SP493-201ENST00000364115 91 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
NPHP4O75161 MIR513A1-201ENST00000385138 129 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 MIR934-201ENST00000401241 83 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 MIR936-201ENST00000401264 98 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 EIF4EP2-201ENST00000422816 654 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 AL591043.1-201ENST00000432461 424 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.3□□□□□ -2.2
NPHP4O75161 JTBP1-201ENST00000441314 247 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.3□□□□□ -2.2
NPHP4O75161 MTCYBP1-201ENST00000454315 1119 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.3□□□□□ -2.2
NPHP4O75161 MTND2P14-201ENST00000482139 351 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.3□□□□□ -2.2
NPHP4O75161 AC008834.1-201ENST00000511612 175 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.3□□□□□ -2.2
NPHP4O75161 COPS8P3-201ENST00000526024 482 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 AL136363.2-201ENST00000604173 851 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 AL022161.1-201ENST00000604390 213 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.3□□□□□ -2.2
NPHP4O75161 AC027449.1-201ENST00000608890 407 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 U1.36-201ENST00000620684 176 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.3□□□□□ -2.2
NPHP4O75161 AC010487.4-201ENST00000637027 61 ntBASIC1.3□□□□□ -2.2
NPHP4O75161 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
NPHP4O75161 MIR424-201ENST00000362227 98 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 RNU6-23P-201ENST00000363283 107 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 RNY1P12-201ENST00000364251 105 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 RNU6-1303P-201ENST00000364841 107 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 SNORD115-7-201ENST00000365306 82 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 RNU6-25P-201ENST00000383873 107 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 RNU6-48P-201ENST00000384161 107 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 RNU6-16P-201ENST00000384385 107 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 RNU6-15P-201ENST00000384534 107 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 RNU6-29P-201ENST00000384637 107 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 RAP1BP3-201ENST00000407180 549 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 RNA5SP100-201ENST00000410903 110 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 RNA5SP59-201ENST00000410922 110 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 AC009310.1-201ENST00000414414 451 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.29□□□□□ -2.2
NPHP4O75161 ART2BP-201ENST00000453501 499 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 SNORD11.1-201ENST00000459482 85 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.29□□□□□ -2.2
NPHP4O75161 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 AC137800.2-201ENST00000574375 120 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 MIR924-201ENST00000638017 53 ntBASIC1.29□□□□□ -2.2
NPHP4O75161 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
NPHP4O75161 RNY4P34-201ENST00000364779 95 ntBASIC1.28□□□□□ -2.2
NPHP4O75161 Y_RNA.560-201ENST00000384689 102 ntBASIC1.28□□□□□ -2.2
NPHP4O75161 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.28□□□□□ -2.2
NPHP4O75161 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
NPHP4O75161 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.28□□□□□ -2.2
NPHP4O75161 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.28□□□□□ -2.2
NPHP4O75161 AC005908.1-201ENST00000468701 347 ntBASIC1.28□□□□□ -2.2
NPHP4O75161 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.28□□□□□ -2.2
NPHP4O75161 RN7SKP179-201ENST00000516126 217 ntBASIC1.28□□□□□ -2.2
NPHP4O75161 RNA5SP121-201ENST00000516537 101 ntBASIC1.28□□□□□ -2.2
NPHP4O75161 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.28□□□□□ -2.2
NPHP4O75161 AC011458.1-201ENST00000604034 617 ntBASIC1.28□□□□□ -2.2
NPHP4O75161 FAM71BP1-201ENST00000604431 523 ntBASIC1.28□□□□□ -2.2
NPHP4O75161 AL136370.1-201ENST00000608166 691 ntBASIC1.28□□□□□ -2.2
NPHP4O75161 RMST_4.1-201ENST00000616886 107 ntBASIC1.28□□□□□ -2.2
NPHP4O75161 AC120349.3-201ENST00000624377 529 ntBASIC1.28□□□□□ -2.2
NPHP4O75161 MTND5P9-201ENST00000503854 1755 ntBASIC1.27□□□□□ -2.21
NPHP4O75161 Y_RNA.99-201ENST00000363138 105 ntBASIC1.27□□□□□ -2.21
NPHP4O75161 SNORA70.7-201ENST00000384159 133 ntBASIC1.27□□□□□ -2.21
NPHP4O75161 Y_RNA.598-201ENST00000410480 95 ntBASIC1.27□□□□□ -2.21
NPHP4O75161 RNU2-41P-201ENST00000410991 178 ntBASIC1.27□□□□□ -2.21
NPHP4O75161 RNU6-607P-201ENST00000411283 108 ntBASIC1.27□□□□□ -2.21
NPHP4O75161 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.27□□□□□ -2.21
NPHP4O75161 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
NPHP4O75161 AL162395.1-201ENST00000457882 422 ntBASIC1.27□□□□□ -2.21
NPHP4O75161 RNA5SP476-201ENST00000516613 103 ntBASIC1.27□□□□□ -2.21
NPHP4O75161 AC087883.1-201ENST00000551882 391 ntBASIC1.27□□□□□ -2.21
NPHP4O75161 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.27□□□□□ -2.21
NPHP4O75161 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.27□□□□□ -2.21
NPHP4O75161 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.27□□□□□ -2.21
NPHP4O75161 MIR3169-201ENST00000578032 83 ntBASIC1.27□□□□□ -2.21
NPHP4O75161 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.27□□□□□ -2.21
NPHP4O75161 AC022022.2-201ENST00000602989 360 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms