Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip2Q9Z0H8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clip2Q9Z0H8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Clip2Q9Z0H8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clip2Q9Z0H8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Clip2Q9Z0H8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip2Q9Z0H8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip2Q9Z0H8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip2Q9Z0H8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip2Q9Z0H8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip2Q9Z0H8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip2Q9Z0H8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Mir6404-201ENSMUST00000183699 94 ntBASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Mzt1-203ENSMUST00000227948 952 ntBASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip2Q9Z0H8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Gm25406-201ENSMUST00000157599 105 ntBASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip2Q9Z0H8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Gm6296-201ENSMUST00000222599 943 ntBASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip2Q9Z0H8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip2Q9Z0H8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip2Q9Z0H8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip2Q9Z0H8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clip2Q9Z0H8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip2Q9Z0H8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Clip2Q9Z0H8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Clip2Q9Z0H8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.67■□□□□ 0.58
Clip2Q9Z0H8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.67■□□□□ 0.58
Clip2Q9Z0H8 Gm44357-201ENSMUST00000195897 142 ntBASIC18.67■□□□□ 0.58
Clip2Q9Z0H8 Gm19658-201ENSMUST00000196231 138 ntBASIC18.67■□□□□ 0.58
Clip2Q9Z0H8 Gm44367-201ENSMUST00000196836 138 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms