Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Gm12350-201ENSMUST00000121208 462 ntBASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Mir5126-201ENSMUST00000175513 77 ntBASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarcb1Q9Z0H3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcb1Q9Z0H3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Gm7222-201ENSMUST00000117512 906 ntBASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Gm18622-201ENSMUST00000219361 595 ntBASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 AV026068-213ENSMUST00000223675 1171 ntBASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcb1Q9Z0H3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Gm1401-201ENSMUST00000122048 772 ntBASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Gm18206-201ENSMUST00000207027 926 ntBASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 AW822252-206ENSMUST00000208904 237 ntBASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcb1Q9Z0H3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smarcb1Q9Z0H3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smarcb1Q9Z0H3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smarcb1Q9Z0H3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.64■□□□□ 0.25
Smarcb1Q9Z0H3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms