Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cx3cr1Q9Z0D9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm15378-201ENSMUST00000121894 207 ntBASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.68□□□□□ -0.22
Cx3cr1Q9Z0D9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cx3cr1Q9Z0D9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cx3cr1Q9Z0D9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms