Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.66■□□□□ 0.26
Clcn5Q9WVD4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Gm7230-201ENSMUST00000173026 815 ntBASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcn5Q9WVD4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcn5Q9WVD4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Gm14822-201ENSMUST00000122247 291 ntBASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Gm44450-201ENSMUST00000199528 114 ntBASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcn5Q9WVD4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcn5Q9WVD4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms