Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rfwd2Q9R1A8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
Rfwd2Q9R1A8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd2Q9R1A8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd2Q9R1A8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd2Q9R1A8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Gm5417-201ENSMUST00000079706 384 ntBASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd2Q9R1A8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms