Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn2Q9R0A1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Gm23634-201ENSMUST00000175071 91 ntBASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn2Q9R0A1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Gm26039-201ENSMUST00000158152 144 ntBASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn2Q9R0A1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn2Q9R0A1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clcn2Q9R0A1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Clcn2Q9R0A1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clcn2Q9R0A1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn2Q9R0A1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Clcn2Q9R0A1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Clcn2Q9R0A1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn2Q9R0A1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Clcn2Q9R0A1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn2Q9R0A1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms