Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp1Q9R060 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nubp1Q9R060 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nubp1Q9R060 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Gm6089-201ENSMUST00000197666 938 ntBASIC14.12□□□□□ -0.15
Nubp1Q9R060 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.12□□□□□ -0.15
Nubp1Q9R060 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp1Q9R060 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.12□□□□□ -0.15
Nubp1Q9R060 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.11□□□□□ -0.15
Nubp1Q9R060 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nubp1Q9R060 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.11□□□□□ -0.15
Nubp1Q9R060 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Gm14057-201ENSMUST00000120631 482 ntBASIC14.11□□□□□ -0.15
Nubp1Q9R060 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Gm28745-201ENSMUST00000190069 305 ntBASIC14.11□□□□□ -0.15
Nubp1Q9R060 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nubp1Q9R060 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.1□□□□□ -0.15
Nubp1Q9R060 Gm14822-201ENSMUST00000122247 291 ntBASIC14.1□□□□□ -0.15
Nubp1Q9R060 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Gm5186-201ENSMUST00000218781 920 ntBASIC14.1□□□□□ -0.15
Nubp1Q9R060 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms