Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf4Q9QZS2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf4Q9QZS2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf4Q9QZS2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.33■□□□□ 0.21
Rnf4Q9QZS2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf4Q9QZS2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf4Q9QZS2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Rnf4Q9QZS2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Gm42545-201ENSMUST00000202755 922 ntBASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf4Q9QZS2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Gm13148-201ENSMUST00000118892 745 ntBASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rnf4Q9QZS2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Gm2559-201ENSMUST00000201323 363 ntBASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf4Q9QZS2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf4Q9QZS2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Rnf4Q9QZS2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf4Q9QZS2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rnf4Q9QZS2 BC037039-201ENSMUST00000192003 2205 ntBASIC16.3■□□□□ 0.2
Rnf4Q9QZS2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms