Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.2■□□□□ 0.5
Hmgn5Q9JL35 Gm18284-201ENSMUST00000172604 624 ntBASIC18.2■□□□□ 0.5
Hmgn5Q9JL35 Gm18666-201ENSMUST00000190039 958 ntBASIC18.2■□□□□ 0.5
Hmgn5Q9JL35 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn5Q9JL35 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn5Q9JL35 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn5Q9JL35 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn5Q9JL35 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn5Q9JL35 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn5Q9JL35 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn5Q9JL35 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn5Q9JL35 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn5Q9JL35 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn5Q9JL35 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn5Q9JL35 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn5Q9JL35 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn5Q9JL35 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Hmgn5Q9JL35 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms