Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn5aQ9JJV9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Gm6257-201ENSMUST00000163864 910 ntBASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Gm44335-201ENSMUST00000196879 141 ntBASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Gm44297-201ENSMUST00000198304 141 ntBASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Gm44346-201ENSMUST00000198851 141 ntBASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn5aQ9JJV9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 Gm27494-201ENSMUST00000184735 189 ntBASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn5aQ9JJV9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Mir6956-201ENSMUST00000183598 62 ntBASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Gm5177-201ENSMUST00000183092 997 ntBASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn5aQ9JJV9 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Gm5312-201ENSMUST00000203728 547 ntBASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Scn5aQ9JJV9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Gm7787-201ENSMUST00000216858 688 ntBASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.53■□□□□ 0.24
Scn5aQ9JJV9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms