Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Gm7213-201ENSMUST00000215977 950 ntBASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Gm18421-201ENSMUST00000204122 625 ntBASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herpud1Q9JJK5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Gm13559-201ENSMUST00000120476 863 ntBASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herpud1Q9JJK5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herpud1Q9JJK5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms