Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cml3Q9JIY8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cml3Q9JIY8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Gm9731-201ENSMUST00000209480 747 ntBASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Gm20049-201ENSMUST00000219950 730 ntBASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cml3Q9JIY8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Asic1-205ENSMUST00000228185 1818 ntBASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cml3Q9JIY8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms