Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1fQ9JIS7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1fQ9JIS7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.21■□□□□ 0.51
Cacna1fQ9JIS7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1fQ9JIS7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1fQ9JIS7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1fQ9JIS7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.21■□□□□ 0.51
Cacna1fQ9JIS7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Cacna1fQ9JIS7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1fQ9JIS7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1fQ9JIS7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1fQ9JIS7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cacna1fQ9JIS7 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.21■□□□□ 0.51
Cacna1fQ9JIS7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Cacna1fQ9JIS7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cacna1fQ9JIS7 Gm12008-201ENSMUST00000117791 755 ntBASIC18.21■□□□□ 0.5
Cacna1fQ9JIS7 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.21■□□□□ 0.5
Cacna1fQ9JIS7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cacna1fQ9JIS7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cacna1fQ9JIS7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Cacna1fQ9JIS7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Gm26308-201ENSMUST00000157768 69 ntBASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.18■□□□□ 0.5
Cacna1fQ9JIS7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cacna1fQ9JIS7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms