Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Copb1Q9JIF7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Copb1Q9JIF7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Copb1Q9JIF7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Copb1Q9JIF7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.69■□□□□ 0.42
Copb1Q9JIF7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Copb1Q9JIF7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.69■□□□□ 0.42
Copb1Q9JIF7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Gm13559-201ENSMUST00000120476 863 ntBASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Mir1668-201ENSMUST00000184114 107 ntBASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Copb1Q9JIF7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 App-207ENSMUST00000227737 2827 ntBASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Copb1Q9JIF7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Copb1Q9JIF7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Copb1Q9JIF7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Copb1Q9JIF7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.64■□□□□ 0.42
Copb1Q9JIF7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Copb1Q9JIF7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Copb1Q9JIF7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms