Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Gm34391-201ENSMUST00000203706 907 ntBASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rtp4Q9ER80 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rtp4Q9ER80 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Rtp4Q9ER80 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Rtp4Q9ER80 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rtp4Q9ER80 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.08■□□□□ 0.01
Rtp4Q9ER80 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rtp4Q9ER80 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.08■□□□□ 0
Rtp4Q9ER80 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rtp4Q9ER80 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rtp4Q9ER80 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.08■□□□□ 0
Rtp4Q9ER80 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.08■□□□□ 0
Rtp4Q9ER80 Gm18421-201ENSMUST00000204122 625 ntBASIC15.08■□□□□ 0
Rtp4Q9ER80 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Rtp4Q9ER80 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.08■□□□□ 0
Rtp4Q9ER80 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rtp4Q9ER80 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Rtp4Q9ER80 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Rtp4Q9ER80 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rtp4Q9ER80 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rtp4Q9ER80 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rtp4Q9ER80 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rtp4Q9ER80 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rtp4Q9ER80 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rtp4Q9ER80 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rtp4Q9ER80 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rtp4Q9ER80 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rtp4Q9ER80 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.08■□□□□ 0
Rtp4Q9ER80 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rtp4Q9ER80 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rtp4Q9ER80 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.07■□□□□ 0
Rtp4Q9ER80 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.07■□□□□ 0
Rtp4Q9ER80 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.07■□□□□ 0
Rtp4Q9ER80 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rtp4Q9ER80 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.07■□□□□ 0
Rtp4Q9ER80 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rtp4Q9ER80 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.07■□□□□ 0
Rtp4Q9ER80 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.07■□□□□ 0
Rtp4Q9ER80 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Rtp4Q9ER80 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rtp4Q9ER80 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.07■□□□□ 0
Rtp4Q9ER80 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rtp4Q9ER80 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rtp4Q9ER80 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rtp4Q9ER80 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rtp4Q9ER80 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rtp4Q9ER80 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.07■□□□□ 0
Rtp4Q9ER80 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.07■□□□□ 0
Rtp4Q9ER80 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rtp4Q9ER80 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtp4Q9ER80 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Rtp4Q9ER80 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.06■□□□□ 0
Rtp4Q9ER80 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rtp4Q9ER80 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rtp4Q9ER80 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rtp4Q9ER80 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Rtp4Q9ER80 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtp4Q9ER80 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.06■□□□□ 0
Rtp4Q9ER80 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.06■□□□□ 0
Rtp4Q9ER80 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtp4Q9ER80 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtp4Q9ER80 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Rtp4Q9ER80 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtp4Q9ER80 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rtp4Q9ER80 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rtp4Q9ER80 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rtp4Q9ER80 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rtp4Q9ER80 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rtp4Q9ER80 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Rtp4Q9ER80 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.06■□□□□ 0
Rtp4Q9ER80 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Rtp4Q9ER80 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rtp4Q9ER80 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rtp4Q9ER80 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rtp4Q9ER80 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rtp4Q9ER80 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Rtp4Q9ER80 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms