Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf1Q9EPU0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf1Q9EPU0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.25■□□□□ 0.51
Upf1Q9EPU0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Upf1Q9EPU0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC18.25■□□□□ 0.51
Upf1Q9EPU0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf1Q9EPU0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Upf1Q9EPU0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf1Q9EPU0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf1Q9EPU0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf1Q9EPU0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Upf1Q9EPU0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upf1Q9EPU0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Gm16198-201ENSMUST00000118766 670 ntBASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Gm25144-201ENSMUST00000179561 110 ntBASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Gm25352-201ENSMUST00000179815 110 ntBASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upf1Q9EPU0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Gm18246-201ENSMUST00000221023 728 ntBASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upf1Q9EPU0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.22■□□□□ 0.51
Upf1Q9EPU0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upf1Q9EPU0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upf1Q9EPU0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms