Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.32■□□□□ 0.68
Chmp4cQ9D7F7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Prob1-201ENSMUST00000097619 3021 ntBASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.31■□□□□ 0.68
Chmp4cQ9D7F7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Gm16061-201ENSMUST00000122167 857 ntBASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Mir5130-201ENSMUST00000175160 84 ntBASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Gm18421-201ENSMUST00000204122 625 ntBASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp4cQ9D7F7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Gm11336-201ENSMUST00000118168 334 ntBASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Gm29340-201ENSMUST00000188763 3854 ntBASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp4cQ9D7F7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 App-207ENSMUST00000227737 2827 ntBASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chmp4cQ9D7F7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms