Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Gm10052-201ENSMUST00000168019 960 ntBASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Gm18101-201ENSMUST00000215769 548 ntBASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Gm7729-201ENSMUST00000050143 801 ntBASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc7Q9D541 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Gm10252-201ENSMUST00000209541 832 ntBASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc7Q9D541 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc7Q9D541 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ccdc7Q9D541 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc7Q9D541 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc7Q9D541 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc7Q9D541 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc7Q9D541 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc7Q9D541 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.83■□□□□ 0.61
Ccdc7Q9D541 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc7Q9D541 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc7Q9D541 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms