Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snx29Q9D3S3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Gm15358-201ENSMUST00000119249 520 ntBASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.65■□□□□ 0.42
Snx29Q9D3S3 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.65■□□□□ 0.42
Snx29Q9D3S3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Snx29Q9D3S3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Gm25911-201ENSMUST00000157621 56 ntBASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.64■□□□□ 0.41
Snx29Q9D3S3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Snx29Q9D3S3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Gm45167-201ENSMUST00000208007 322 ntBASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Snx29Q9D3S3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx29Q9D3S3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx29Q9D3S3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Snx29Q9D3S3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx29Q9D3S3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Snx29Q9D3S3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Snx29Q9D3S3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Snx29Q9D3S3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Snx29Q9D3S3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms