Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tlr3Q99MB1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Mir3081-201ENSMUST00000175305 84 ntBASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tlr3Q99MB1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Tlr3Q99MB1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tlr3Q99MB1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tlr3Q99MB1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms