Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nkx6-1Q99MA9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nkx6-1Q99MA9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Nkx6-1Q99MA9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Gm11764-201ENSMUST00000120221 623 ntBASIC15.05■□□□□ -0
Nkx6-1Q99MA9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Gm27646-201ENSMUST00000183989 110 ntBASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.05■□□□□ -0
Nkx6-1Q99MA9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nkx6-1Q99MA9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Gm5682-201ENSMUST00000173402 505 ntBASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Mir6956-201ENSMUST00000183598 62 ntBASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nkx6-1Q99MA9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms