Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RtcbQ99LF4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.86■□□□□ 0.77
RtcbQ99LF4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.86■□□□□ 0.77
RtcbQ99LF4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RtcbQ99LF4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Gm13616-201ENSMUST00000120600 222 ntBASIC19.85■□□□□ 0.77
RtcbQ99LF4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.85■□□□□ 0.77
RtcbQ99LF4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RtcbQ99LF4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.84■□□□□ 0.77
RtcbQ99LF4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.84■□□□□ 0.77
RtcbQ99LF4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RtcbQ99LF4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RtcbQ99LF4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RtcbQ99LF4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Gm5186-201ENSMUST00000218781 920 ntBASIC19.83■□□□□ 0.77
RtcbQ99LF4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RtcbQ99LF4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.83■□□□□ 0.76
RtcbQ99LF4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RtcbQ99LF4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RtcbQ99LF4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RtcbQ99LF4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RtcbQ99LF4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RtcbQ99LF4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.83■□□□□ 0.76
RtcbQ99LF4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.82■□□□□ 0.76
RtcbQ99LF4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RtcbQ99LF4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RtcbQ99LF4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RtcbQ99LF4 Gm13597-201ENSMUST00000121239 375 ntBASIC19.82■□□□□ 0.76
RtcbQ99LF4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RtcbQ99LF4 Gm9682-201ENSMUST00000197505 556 ntBASIC19.82■□□□□ 0.76
RtcbQ99LF4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.82■□□□□ 0.76
RtcbQ99LF4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RtcbQ99LF4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RtcbQ99LF4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RtcbQ99LF4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.82■□□□□ 0.76
RtcbQ99LF4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RtcbQ99LF4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms