Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.28■□□□□ 0.2
Cdk9Q99J95 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.28■□□□□ 0.2
Cdk9Q99J95 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cdk9Q99J95 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk9Q99J95 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdk9Q99J95 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.27■□□□□ 0.2
Cdk9Q99J95 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdk9Q99J95 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdk9Q99J95 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdk9Q99J95 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdk9Q99J95 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdk9Q99J95 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdk9Q99J95 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Cdk9Q99J95 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdk9Q99J95 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.26■□□□□ 0.19
Cdk9Q99J95 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.26■□□□□ 0.19
Cdk9Q99J95 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdk9Q99J95 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Gm43183-201ENSMUST00000200632 547 ntBASIC16.25■□□□□ 0.19
Cdk9Q99J95 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.25■□□□□ 0.19
Cdk9Q99J95 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdk9Q99J95 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.24■□□□□ 0.19
Cdk9Q99J95 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Gm15378-201ENSMUST00000121894 207 ntBASIC16.24■□□□□ 0.19
Cdk9Q99J95 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms