Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1dQ99246 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1dQ99246 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1dQ99246 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1dQ99246 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1dQ99246 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.03■□□□□ 0.16
Cacna1dQ99246 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1dQ99246 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.03■□□□□ 0.16
Cacna1dQ99246 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1dQ99246 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.03■□□□□ 0.16
Cacna1dQ99246 Gm37935-201ENSMUST00000192012 982 ntBASIC16.03■□□□□ 0.16
Cacna1dQ99246 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1dQ99246 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1dQ99246 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1dQ99246 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.02■□□□□ 0.16
Cacna1dQ99246 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1dQ99246 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1dQ99246 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.02■□□□□ 0.16
Cacna1dQ99246 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.02■□□□□ 0.16
Cacna1dQ99246 Psmb5-202ENSMUST00000227257 622 ntBASIC16.02■□□□□ 0.16
Cacna1dQ99246 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1dQ99246 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1dQ99246 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cacna1dQ99246 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1dQ99246 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1dQ99246 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1dQ99246 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.01■□□□□ 0.15
Cacna1dQ99246 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.01■□□□□ 0.15
Cacna1dQ99246 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1dQ99246 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cacna1dQ99246 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Cacna1dQ99246 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16■□□□□ 0.15
Cacna1dQ99246 Gm37584-201ENSMUST00000193595 1290 ntBASIC16■□□□□ 0.15
Cacna1dQ99246 AC084391.1-201ENSMUST00000200651 141 ntBASIC16■□□□□ 0.15
Cacna1dQ99246 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 AC127349.1-201ENSMUST00000224590 266 ntBASIC16■□□□□ 0.15
Cacna1dQ99246 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Gm15635-204ENSMUST00000208024 2539 ntBASIC16■□□□□ 0.15
Cacna1dQ99246 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Gm4995-201ENSMUST00000117247 432 ntBASIC16■□□□□ 0.15
Cacna1dQ99246 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Gm27628-201ENSMUST00000184911 107 ntBASIC16■□□□□ 0.15
Cacna1dQ99246 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16■□□□□ 0.15
Cacna1dQ99246 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16■□□□□ 0.15
Cacna1dQ99246 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16■□□□□ 0.15
Cacna1dQ99246 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cacna1dQ99246 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1dQ99246 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms