Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Gm37179-201ENSMUST00000194862 823 ntBASIC14.28□□□□□ -0.12
Chmp1aQ921W0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Chmp1aQ921W0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1aQ921W0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Chmp1aQ921W0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Chmp1aQ921W0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Chmp1aQ921W0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1aQ921W0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1aQ921W0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1aQ921W0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1aQ921W0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chmp1aQ921W0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.27□□□□□ -0.13
Chmp1aQ921W0 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.27□□□□□ -0.13
Chmp1aQ921W0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp1aQ921W0 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp1aQ921W0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp1aQ921W0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Chmp1aQ921W0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Chmp1aQ921W0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp1aQ921W0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp1aQ921W0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp1aQ921W0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chmp1aQ921W0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.27□□□□□ -0.13
Chmp1aQ921W0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Gm10602-201ENSMUST00000098239 609 ntBASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chmp1aQ921W0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Chmp1aQ921W0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms