Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha2Q91Y17 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.17■□□□□ 0.34
Pcdha2Q91Y17 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha2Q91Y17 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha2Q91Y17 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha2Q91Y17 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha2Q91Y17 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.17■□□□□ 0.34
Pcdha2Q91Y17 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha2Q91Y17 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdha2Q91Y17 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Gm12644-201ENSMUST00000119935 606 ntBASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdha2Q91Y17 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha2Q91Y17 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Pcdha2Q91Y17 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdha2Q91Y17 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdha2Q91Y17 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdha2Q91Y17 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Gm24589-201ENSMUST00000116692 94 ntBASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Gm27741-201ENSMUST00000185060 237 ntBASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Gm7506-201ENSMUST00000207758 815 ntBASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha2Q91Y17 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms