Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb18Q91Y02 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb18Q91Y02 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.83■□□□□ 0.29
Pcdhb18Q91Y02 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb18Q91Y02 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb18Q91Y02 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb18Q91Y02 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Gm4535-201ENSMUST00000182274 558 ntBASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Gm10355-201ENSMUST00000097146 517 ntBASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb18Q91Y02 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Gm13418-201ENSMUST00000119097 944 ntBASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdhb18Q91Y02 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Gm25990-201ENSMUST00000102440 86 ntBASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Mir5126-201ENSMUST00000175513 77 ntBASIC16.8■□□□□ 0.28
Pcdhb18Q91Y02 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms