Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Gm45072-201ENSMUST00000208673 929 ntBASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 AC172027.1-201ENSMUST00000217659 337 ntBASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhb20Q91XZ9 Gm43435-201ENSMUST00000199996 1438 ntBASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Gm6649-201ENSMUST00000199743 1165 ntBASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Gm19540-201ENSMUST00000221843 810 ntBASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhb20Q91XZ9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 CT009713.1-201ENSMUST00000224828 853 ntBASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhb20Q91XZ9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb20Q91XZ9 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.58■□□□□ 0.09
Pcdhb20Q91XZ9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb20Q91XZ9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhb20Q91XZ9 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC15.58■□□□□ 0.09
Pcdhb20Q91XZ9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Gm7153-201ENSMUST00000117092 455 ntBASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Defa-ps4-201ENSMUST00000118021 183 ntBASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhb20Q91XZ9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms