Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga11Q91XY8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga11Q91XY8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga11Q91XY8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga11Q91XY8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdhga11Q91XY8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga11Q91XY8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga11Q91XY8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga11Q91XY8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga11Q91XY8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Pcdhga11Q91XY8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhga11Q91XY8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhga11Q91XY8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhga11Q91XY8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Pcdhga11Q91XY8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Gm10566-201ENSMUST00000086739 996 ntBASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga11Q91XY8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga11Q91XY8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Gm10013-201ENSMUST00000106074 672 ntBASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Gm36967-201ENSMUST00000193814 266 ntBASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga11Q91XY8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga11Q91XY8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga11Q91XY8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga11Q91XY8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhga11Q91XY8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhga11Q91XY8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga11Q91XY8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga11Q91XY8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms