Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga6Q91XY2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhga6Q91XY2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhga6Q91XY2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Phf7-203ENSMUST00000226565 1971 ntBASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Gm27000-201ENSMUST00000182943 842 ntBASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.04■□□□□ 0.16
Pcdhga6Q91XY2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhga6Q91XY2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Gm14822-201ENSMUST00000122247 291 ntBASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Gm7230-201ENSMUST00000173026 815 ntBASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhga6Q91XY2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga6Q91XY2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhga6Q91XY2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga6Q91XY2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pcdhga6Q91XY2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcdhga6Q91XY2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga6Q91XY2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga6Q91XY2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga6Q91XY2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhga6Q91XY2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcdhga6Q91XY2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Pcdhga6Q91XY2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga6Q91XY2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhga6Q91XY2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhga6Q91XY2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhga6Q91XY2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms