Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgb4Q91XX6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Gm10231-201ENSMUST00000181584 441 ntBASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Gm44882-201ENSMUST00000205702 802 ntBASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Gm10175-202ENSMUST00000208752 441 ntBASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhgb4Q91XX6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgb4Q91XX6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgb4Q91XX6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgb4Q91XX6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgb4Q91XX6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.08■□□□□ 0.33
Pcdhgb4Q91XX6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb4Q91XX6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb4Q91XX6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.08■□□□□ 0.32
Pcdhgb4Q91XX6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhgb4Q91XX6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb4Q91XX6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb4Q91XX6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb4Q91XX6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb4Q91XX6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb4Q91XX6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhgb4Q91XX6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb4Q91XX6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgb4Q91XX6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhgb4Q91XX6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms