Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ddx41Q91VN6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Gm15372-201ENSMUST00000120729 834 ntBASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx41Q91VN6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ddx41Q91VN6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx41Q91VN6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx41Q91VN6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Gm13312-201ENSMUST00000119631 718 ntBASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Gm43347-201ENSMUST00000200226 580 ntBASIC18.43■□□□□ 0.54
Ddx41Q91VN6 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms