Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tram1Q91V04 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tram1Q91V04 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Tram1Q91V04 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Gm11249-201ENSMUST00000117071 859 ntBASIC13.92□□□□□ -0.18
Tram1Q91V04 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.92□□□□□ -0.18
Tram1Q91V04 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.92□□□□□ -0.18
Tram1Q91V04 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.92□□□□□ -0.18
Tram1Q91V04 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.92□□□□□ -0.18
Tram1Q91V04 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Tram1Q91V04 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Tram1Q91V04 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tram1Q91V04 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Tram1Q91V04 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tram1Q91V04 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tram1Q91V04 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.91□□□□□ -0.18
Tram1Q91V04 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Tram1Q91V04 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Tram1Q91V04 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.91□□□□□ -0.18
Tram1Q91V04 Gm10849-201ENSMUST00000100397 618 ntBASIC13.91□□□□□ -0.18
Tram1Q91V04 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.91□□□□□ -0.18
Tram1Q91V04 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
Tram1Q91V04 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Tram1Q91V04 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.91□□□□□ -0.18
Tram1Q91V04 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.91□□□□□ -0.18
Tram1Q91V04 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.91□□□□□ -0.18
Tram1Q91V04 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tram1Q91V04 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
Tram1Q91V04 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Tram1Q91V04 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Tram1Q91V04 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.9□□□□□ -0.18
Tram1Q91V04 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.9□□□□□ -0.18
Tram1Q91V04 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.9□□□□□ -0.18
Tram1Q91V04 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Tram1Q91V04 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Tram1Q91V04 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.9□□□□□ -0.19
Tram1Q91V04 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tram1Q91V04 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tram1Q91V04 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Tram1Q91V04 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Tram1Q91V04 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Tram1Q91V04 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tram1Q91V04 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tram1Q91V04 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tram1Q91V04 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Tram1Q91V04 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Tram1Q91V04 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Tram1Q91V04 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms