Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.11■□□□□ 0.33
TraipQ8VIG6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TraipQ8VIG6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.1■□□□□ 0.33
TraipQ8VIG6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Gm11764-201ENSMUST00000120221 623 ntBASIC17.1■□□□□ 0.33
TraipQ8VIG6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.1■□□□□ 0.33
TraipQ8VIG6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TraipQ8VIG6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Gm27525-201ENSMUST00000184465 107 ntBASIC17.09■□□□□ 0.33
TraipQ8VIG6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.09■□□□□ 0.33
TraipQ8VIG6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.09■□□□□ 0.33
TraipQ8VIG6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.09■□□□□ 0.33
TraipQ8VIG6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Gm37648-201ENSMUST00000192072 2563 ntBASIC17.09■□□□□ 0.33
TraipQ8VIG6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TraipQ8VIG6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TraipQ8VIG6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TraipQ8VIG6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TraipQ8VIG6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
TraipQ8VIG6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TraipQ8VIG6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TraipQ8VIG6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TraipQ8VIG6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TraipQ8VIG6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.08■□□□□ 0.33
TraipQ8VIG6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TraipQ8VIG6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.08■□□□□ 0.32
TraipQ8VIG6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Psmb5-202ENSMUST00000227257 622 ntBASIC17.08■□□□□ 0.32
TraipQ8VIG6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TraipQ8VIG6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TraipQ8VIG6 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.07■□□□□ 0.32
TraipQ8VIG6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TraipQ8VIG6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TraipQ8VIG6 Gm13323-201ENSMUST00000120245 1151 ntBASIC17.07■□□□□ 0.32
TraipQ8VIG6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.07■□□□□ 0.32
TraipQ8VIG6 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.07■□□□□ 0.32
TraipQ8VIG6 Gm43868-201ENSMUST00000205187 2114 ntBASIC17.07■□□□□ 0.32
TraipQ8VIG6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.07■□□□□ 0.32
TraipQ8VIG6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TraipQ8VIG6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TraipQ8VIG6 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.07■□□□□ 0.32
TraipQ8VIG6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TraipQ8VIG6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TraipQ8VIG6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TraipQ8VIG6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.07■□□□□ 0.32
TraipQ8VIG6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TraipQ8VIG6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TraipQ8VIG6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TraipQ8VIG6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms