Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cspg4Q8VHY0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cspg4Q8VHY0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cspg4Q8VHY0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cspg4Q8VHY0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cspg4Q8VHY0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cspg4Q8VHY0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms